RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SNX27Q96L92 541 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 MTG1Q9BT17 334 aaPredicted RBP18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 UNKQ9C0B0 810 aaKnown RBP18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 FZD8Q9H461 694 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 KLHL8Q9P2G9 620 aaPredicted RBP18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 DYTNA2CJ06 578 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 GPC4O75487 556 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 MATN1P21941 496 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 ATP6V0D1P61421 351 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 CERCAMQ5T4B2 595 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 ZBTB46Q86UZ6 589 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 RAB2BQ8WUD1 216 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 CCDC138Q96M89 665 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 GPR78Q96P69 363 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 SLC39A3Q9BRY0 314 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 SEZ6LQ9BYH1 1024 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 MRPL46Q9H2W6 279 aaKnown RBP18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 NANOGQ9H9S0 305 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 ZFYVE28Q9HCC9 887 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 CHRAC1Q9NRG0 131 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 SMPD3Q9NY59 655 aaPredicted RBP18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 MTF2Q9Y483 593 aaPredicted RBP18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 INO80B-WBP1J3KQ70 363 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 ACOX3O15254 700 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 CYP2C9P11712 490 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 CD300CQ08708 224 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 PITRM1Q5JRX3 1037 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 CCNYL2Q5T2Q4 361 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 MROQ9BYG7 248 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 RHOBTB2Q9BYZ6 727 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 GPN2Q9H9Y4 310 aaPredicted RBP18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 TBC1D13Q9NVG8 400 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 GMPR2Q9P2T1 348 aaKnown RBP18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 PSME2Q9UL46 239 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 GIT1Q9Y2X7 761 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 FIS1Q9Y3D6 152 aa18.73■□□□□ 0.59
SFSWAP-207ENST00000538548 WNT10BO00744 389 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 AQP9O43315 295 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 DNAJB13P59910 316 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 C1QTNF8P60827 252 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 CYBRD1Q53TN4 286 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 FAM160B1Q5W0V3 765 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 OMDQ99983 421 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 OSBPL2Q9H1P3 480 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 TNFSF13BQ9Y275 285 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 CPQQ9Y646 472 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 ERI2A8K979 691 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 KCNK1O00180 336 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 GAS2O43903 313 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 TPST1O60507 370 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 SEC14L2O76054 403 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 HNRNPLP14866 589 aaKnown RBP eCLIP18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 JUNBP17275 347 aaPredicted RBP18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 NPY2RP49146 381 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 TUBA3CQ13748 450 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 STXBP2Q15833 593 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 PPP1R3AQ16821 1122 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 ZNF773Q6PK81 442 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 USP51Q70EK9 711 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 CMTR2Q8IYT2 770 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 LRRC71Q8N4P6 559 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 TXNDC5Q8NBS9 432 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 REPS2Q8NFH8 660 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 CLEC4CQ8WTT0 213 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 C17orf50Q8WW18 174 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 ZNF347Q96SE7 839 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 POMKQ9H5K3 350 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 MRM3Q9HC36 420 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 FZD10Q9ULW2 581 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 RAD54BQ9Y620 910 aa18.72■□□□□ 0.59
SFSWAP-207ENST00000538548 EI24O14681 340 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 STAG3L1P0CL83 205 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 FCGR1AP12314 374 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 ARSAP15289 507 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 IREB2P48200 963 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 DEPDC1Q5TB30 811 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 LCN8Q6JVE9 175 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 STRADAQ7RTN6 431 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 SPPL2CQ8IUH8 684 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 SLC41A1Q8IVJ1 513 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 NXNL1Q96CM4 212 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 MYRFLQ96LU7 910 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 IFT80Q9P2H3 777 aaPredicted RBP18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 ABCD2Q9UBJ2 740 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 DAPK2Q9UIK4 370 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 OXSR1O95747 527 aaPredicted RBP18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 MBL2P11226 248 aaPredicted RBP18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 PTPN3P26045 913 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 OAZ1P54368 228 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 RAB10P61026 200 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 BNIP2Q12982 314 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 SOWAHAQ2M3V2 549 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 KCTD11Q693B1 232 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 CHST15Q7LFX5 561 aaPredicted RBP18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 FAM131BQ86XD5 332 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 OR9I1Q8NGQ6 314 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 RNF139Q8WU17 664 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 STARD8Q92502 1023 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 MRPL57Q9BQC6 102 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 ASB7Q9H672 318 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms