RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 PRKAA1Q13131 559 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 THOC5Q13769 683 aaKnown RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 BLMHQ13867 455 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 POU6F1Q14863 301 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 C5orf22Q49AR2 442 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 SLC9B1Q4ZJI4 515 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 FSCBQ5H9T9 825 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 VARS2Q5ST30 1063 aaKnown RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 VWA5B1Q5TIE3 1220 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 SNX30Q5VWJ9 437 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 AAGABQ6PD74 315 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 LRRC74BQ6ZQY2 392 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 RIPOR1Q6ZS17 1223 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 FAM43BQ6ZT52 329 aaPredicted RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 CEP97Q8IW35 865 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 DENND6AQ8IWF6 608 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 SCN4BQ8IWT1 228 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 LSMEM2Q8N112 164 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 FSTL5Q8N475 847 aaPredicted RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 ATP6V0D2Q8N8Y2 350 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 ACTRT2Q8TDY3 377 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 GDPD5Q8WTR4 605 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 KCTD4Q8WVF5 259 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 CNDP1Q96KN2 507 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 SPATA17Q96L03 361 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 TSNARE1Q96NA8 513 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 ZYG11BQ9C0D3 744 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 ILKAPQ9H0C8 392 aaPredicted RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 MTIF3Q9H2K0 278 aaKnown RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 CXorf56Q9H5V9 222 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 TASP1Q9H6P5 420 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 COG4Q9H9E3 785 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 OLA1Q9NTK5 396 aaKnown RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.33□□□□□ -0.92
DDB1-211ENST00000538280 NMRK1Q9NWW6 199 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 ABI2Q9NYB9 513 aaPredicted RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 DONSONQ9NYP3 566 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 MPP6Q9NZW5 540 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 GMIPQ9P107 970 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 VTI1BQ9UEU0 232 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 SLC2A6Q9UGQ3 507 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 TLK1Q9UKI8 766 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 ANGPTL2Q9UKU9 493 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 ACOT9Q9Y305 439 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 CHD5Q8TDI0 1954 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 HEATR9A2RTY3 570 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 MEI4A8MW99 385 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 GOLGA8TH3BQL2 631 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 HDAC3O15379 428 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 NVLO15381 856 aaKnown RBP9.32□□□□□ -0.92
DDB1-211ENST00000538280 TLL1O43897 1013 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 DLX3O60479 287 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 FKBP6O75344 327 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 PMPCBO75439 489 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 RTN3O95197 1032 aaPredicted RBP9.32□□□□□ -0.92
DDB1-211ENST00000538280 VAPBO95292 243 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 VNN2O95498 520 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 MOCS2O96007 188 aaPredicted RBP9.32□□□□□ -0.92
DDB1-211ENST00000538280 ZDHHC11BP0C7U3 371 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 COX4I1P13073 169 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 STMN1P16949 149 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 ITGAXP20702 1163 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 IBSPP21815 317 aaPredicted RBP9.32□□□□□ -0.92
DDB1-211ENST00000538280 FGFR3P22607 806 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 CHRNA4P43681 627 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 GRIA4P48058 902 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 LEPRP48357 1165 aaKnown RBP9.32□□□□□ -0.92
DDB1-211ENST00000538280 RPL14P50914 215 aaKnown RBP9.32□□□□□ -0.92
DDB1-211ENST00000538280 RENBPP51606 427 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 KPNA2P52292 529 aaKnown RBP9.32□□□□□ -0.92
DDB1-211ENST00000538280 TAS2R39P59534 338 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 PFKPQ01813 784 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 RING1Q06587 406 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 IL10RBQ08334 325 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 ASPHQ12797 758 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 USP4Q13107 963 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 MTA1Q13330 715 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 IHHQ14623 411 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 HERC3Q15034 1050 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 CNGA3Q16281 694 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 DDR2Q16832 855 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 ALFQ53S48 1182 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 TECRLQ5HYJ1 363 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 SH2D4BQ5SQS7 431 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 C6orf163Q5TEZ5 329 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 LMNTD2Q8IXW0 634 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 ARRDC2Q8TBH0 407 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 DNAJC9Q8WXX5 260 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 FAM136AQ96C01 138 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 CMTM5Q96DZ9 223 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 HMCESQ96FZ2 354 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 MAELQ96JY0 434 aaKnown RBP9.32□□□□□ -0.92
DDB1-211ENST00000538280 CLPTM1LQ96KA5 538 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 BTN2A3PQ96KV6 586 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 OR52B2Q96RD2 323 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 RTKNQ9BST9 563 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 THTPAQ9BU02 230 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 FTHL17Q9BXU8 183 aa9.32□□□□□ -0.92
DDB1-211ENST00000538280 MRPL46Q9H2W6 279 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms