RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 SARM1Q6SZW1 724 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 LCTLQ6UWM7 567 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 CHST9Q7L1S5 443 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 CAMK1DQ8IU85 385 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 ZDHHC23Q8IYP9 409 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 C1orf131Q8NDD1 294 aaKnown RBP5.63□□□□□ -1.51
PRKDC-208ENST00000536710 CEP76Q8TAP6 659 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 ZKSCAN4Q969J2 545 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-208ENST00000536710 ZNF333Q96JL9 665 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 MXRA8Q9BRK3 442 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 WDR83Q9BRX9 315 aaKnown RBP5.63□□□□□ -1.51
PRKDC-208ENST00000536710 MXD3Q9BW11 206 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 CDT1Q9H211 546 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 RPS6KA6Q9UK32 745 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 LSM4Q9Y4Z0 139 aaKnown RBP5.63□□□□□ -1.51
PRKDC-208ENST00000536710 RPS6KL1Q9Y6S9 549 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 A0A1W2PPC1 479 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 A0A1W2PQF6 199 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 A0A1W2PRG0 241 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 FRMD3A2A2Y4 597 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 A6NNC1 897 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 AGAP14A8MT82 685 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 BTBD18B2RXH4 712 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 STMND1H3BQB6 276 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 BCAR3O75815 825 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 NKX2-2O95096 273 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 AKR1B1P15121 316 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 SRD5A1P18405 259 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 ITGAXP20702 1163 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 HOXD9P28356 352 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-208ENST00000536710 PSMB10P40306 273 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 GARSP41250 739 aaKnown RBP5.62□□□□□ -1.51
PRKDC-208ENST00000536710 NHLH1Q02575 133 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 NIPAL4Q0D2K0 466 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 DRAP1Q14919 205 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-208ENST00000536710 DAZAP2Q15038 168 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-208ENST00000536710 TCTN1Q2MV58 587 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 ZSCAN23Q3MJ62 389 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 PLEKHO1Q53GL0 409 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-208ENST00000536710 NCAPH2Q6IBW4 605 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 GALNT5Q7Z7M9 940 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 TEX11Q8IYF3 940 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 PRSS3P2Q8NHM4 247 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 WIPF2Q8TF74 440 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-208ENST00000536710 SNRNP27Q8WVK2 155 aaKnown RBP5.62□□□□□ -1.51
PRKDC-208ENST00000536710 JAKMIP2Q96AA8 810 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 C1orf74Q96LT6 269 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 NCAPGQ9BPX3 1015 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 SEMA4CQ9C0C4 833 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 MVB12BQ9H7P6 319 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 FLRT1Q9NZU1 646 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 MSRB1Q9NZV6 116 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 COG5Q9UP83 839 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 MTMR6Q9Y217 621 aa5.62□□□□□ -1.51
PRKDC-208ENST00000536710 UTYO14607 1347 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 ENO3P13929 434 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-208ENST00000536710 COL11A2P13942 1736 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-208ENST00000536710 OLIG2Q13516 323 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 HEPHL1Q6MZM0 1159 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 SLC2A7Q6PXP3 512 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 NOXA1Q86UR1 476 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 GPSM1Q86YR5 675 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 DENND6AQ8IWF6 608 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 ADGRF2Q8IZF7 708 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 PARP16Q8N5Y8 322 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 IGFBPL1Q8WX77 278 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 FEM1CQ96JP0 617 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 PLEKHA4Q9H4M7 779 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 MAGEE1Q9HCI5 957 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 CNOT8Q9UFF9 292 aaKnown RBP5.61□□□□□ -1.51
PRKDC-208ENST00000536710 NDRG3Q9UGV2 375 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 SNX8Q9Y5X2 465 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 COX11Q9Y6N1 276 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 SESN1Q9Y6P5 492 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 A3GALT2U3KPV4 340 aa5.61□□□□□ -1.51
PRKDC-208ENST00000536710 A0A1W2PQ09 198 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 WIPF3A6NGB9 483 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 TLR2O60603 784 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 SLC25A12O75746 678 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 MTA2O94776 668 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 CLDN7O95471 211 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 RB1P06400 928 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 HOXB5P09067 269 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 CBSLP0DN79 551 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 ETFAP13804 333 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 ACSL1P33121 698 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 CBSP35520 551 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 AVPR1AP37288 418 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 PIK3CAP42336 1068 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 CDH12P55289 794 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 SORDQ00796 357 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 EPS8Q12929 822 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 ESCO2Q56NI9 601 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 TMEM71Q6P5X7 295 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 FBXO46Q6PJ61 603 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-208ENST00000536710 TICAM1Q8IUC6 712 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 CCDC13Q8IYE1 715 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 MCPH1Q8NEM0 835 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 TMEM174Q8WUU8 243 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 OTULINQ96BN8 352 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms