RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ETS1P14921 441 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 CR2P20023 1033 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 CES1P23141 567 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 CD68P34810 354 aaPredicted RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 NRLP54845 237 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 ST8SIA6P61647 398 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 SARNPP82979 210 aaKnown RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 ZNF235Q14590 738 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 DLG2Q15700 870 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 PARP6Q2NL67 630 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 DGKKQ5KSL6 1271 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 SPDYAQ5MJ70 313 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 ITPRIPL1Q6GPH6 555 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 KLHDC8BQ8IXV7 354 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 PGBD5Q8N414 524 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 CCDC110Q8TBZ0 833 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 USP33Q8TEY7 942 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 FRS2Q8WU20 508 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 AGAP3Q96P47 875 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 NELL2Q99435 816 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 CINPQ9BW66 212 aaPredicted RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 TMEM245Q9H330 911 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 GLOD4Q9HC38 313 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 TXLNGQ9NUQ3 528 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 GRHL1Q9NZI5 618 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 KLHL8Q9P2G9 620 aaPredicted RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 SHROOM3Q8TF72 1996 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 KRBA1A5PL33 1030 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 MUSKO15146 869 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 TCEA3O75764 348 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 GSRP00390 522 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 EGFP01133 1207 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 SHBGP04278 402 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 ZSCAN5DPP0CG00 497 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 MSH2P43246 934 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 MRPS21P82921 87 aaKnown RBP12.43□□□□□ -0.42
SCARB1-204ENST00000535005 CCINQ13939 588 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 ZNF234Q14588 700 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 RALGPS1Q5JS13 557 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 C22orf39Q6P5X5 142 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 SPATA21Q7Z572 469 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 FBF1Q8TES7 1133 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 SPDL1Q96EA4 605 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 PPP1R2P1Q96PQ5 205 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 FCRL5Q96RD9 977 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 CEP41Q9BYV8 373 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 POLR1EQ9GZS1 481 aaKnown RBP12.43□□□□□ -0.42
SCARB1-204ENST00000535005 SLC25A51Q9H1U9 297 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 GBA3Q9H227 469 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 NT5MQ9NPB1 228 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 MUTYHQ9UIF7 546 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 FBXL21Q9UKT6 434 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 CA14Q9ULX7 337 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 SLC8A2Q9UPR5 921 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 MRPS17Q9Y2R5 130 aaKnown RBP12.43□□□□□ -0.42
SCARB1-204ENST00000535005 FCF1Q9Y324 198 aaKnown RBP12.43□□□□□ -0.42
SCARB1-204ENST00000535005 NCOR1O75376 2440 aa12.43□□□□□ -0.42
SCARB1-204ENST00000535005 RIPK2O43353 540 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 METTL18O95568 372 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 IVDP26440 423 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 RHOAP61586 193 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 ZXDAP98168 799 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 SLC29A2Q14542 456 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 SLC14A2Q15849 920 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 HSF5Q4G112 596 aaPredicted RBP12.42□□□□□ -0.42
SCARB1-204ENST00000535005 EGFLAMQ63HQ2 1017 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 ARHGEF18Q6ZSZ5 1173 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 PRUNE1Q86TP1 453 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 SYNPOQ8N3V7 929 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 ARRDC2Q8TBH0 407 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 ZNF483Q8TF39 744 aaPredicted RBP12.42□□□□□ -0.42
SCARB1-204ENST00000535005 TADA1Q96BN2 335 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 ZNF570Q96NI8 536 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 NECAB3Q96P71 396 aaPredicted RBP12.42□□□□□ -0.42
SCARB1-204ENST00000535005 NUDCD1Q96RS6 583 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 ABCF3Q9NUQ8 709 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 ACTL7BQ9Y614 415 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 BDP1A6H8Y1 2624 aa12.42□□□□□ -0.42
SCARB1-204ENST00000535005 A6NHS1 94 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 TTC34A8MYJ7 566 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 AHCYL1O43865 530 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 NFKB1P19838 968 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 FDFT1P37268 417 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 MAPK8P45983 427 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 RGRP47804 291 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 PLTPP55058 493 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 SNRPD1P62314 119 aaKnown RBP12.41□□□□□ -0.42
SCARB1-204ENST00000535005 CAV1Q03135 178 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 NIPAL4Q0D2K0 466 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 HNRNPA1L2Q32P51 320 aaKnown RBP12.41□□□□□ -0.42
SCARB1-204ENST00000535005 FNDC3BQ53EP0 1204 aaKnown RBP12.41□□□□□ -0.42
SCARB1-204ENST00000535005 CARD16Q5EG05 197 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 TRMT11Q7Z4G4 463 aaKnown RBP12.41□□□□□ -0.42
SCARB1-204ENST00000535005 AGGF1Q8N302 714 aaeCLIP12.41□□□□□ -0.427e-7■■■■■ 27.5
SCARB1-204ENST00000535005 ZNF513Q8N8E2 541 aaPredicted RBP12.41□□□□□ -0.42
SCARB1-204ENST00000535005 OR2AP1Q8NGE2 309 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 FBXO25Q8TCJ0 367 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 DYDC1Q8WWB3 177 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 CKAP2Q8WWK9 683 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 ART4Q93070 314 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms