RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	RIPK3	Q9Y572	518 aa		4.91	□□□□□ -1.62
ECHDC1-223	ENST00000534442	NOX1	Q9Y5S8	564 aa		4.91	□□□□□ -1.62
ECHDC1-223	ENST00000534442	RAD50	Q92878	1312 aa		4.91	□□□□□ -1.62
ECHDC1-223	ENST00000534442	MXRA5	Q9NR99	2828 aa		4.9	□□□□□ -1.62
ECHDC1-223	ENST00000534442	LOXHD1	Q8IVV2	1947 aa		4.9	□□□□□ -1.62
ECHDC1-223	ENST00000534442	PNMA6E	A0A0J9YXQ4	647 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	NDUFA10	O95299	355 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	VNN1	O95497	513 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PPP3CB	P16298	524 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	RBL1	P28749	1068 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	EPHA3	P29320	983 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SEC24C	P53992	1094 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TIRAP	P58753	221 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SLC25A3	Q00325	362 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TBX2	Q13207	712 aa	Predicted RBP	4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	EFR3A	Q14156	821 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ADCK5	Q3MIX3	580 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SPDYE7P	Q495Y7	208 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	HS1BP3	Q53T59	392 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	BEND3	Q5T5X7	828 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SLC9A4	Q6AI14	798 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	RRAGA	Q7L523	313 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	GLRX5	Q86SX6	157 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ERICH1	Q86X53	443 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	IZUMO1	Q8IYV9	350 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	C11orf44	Q8N8P7	122 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CPEB3	Q8NE35	698 aa	Known RBP	4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SLC30A5	Q8TAD4	765 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CSGALNACT1	Q8TDX6	532 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	OSCP1	Q8WVF1	389 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PIGK	Q92643	395 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KAZALD1	Q96I82	304 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PPM1M	Q96MI6	270 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TRAPPC9	Q96Q05	1148 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KXD1	Q9BQD3	176 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PYM1	Q9BRP8	204 aa	Known RBP	4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	NUDT22	Q9BRQ3	303 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	WDR11	Q9BZH6	1224 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TWSG1	Q9GZX9	223 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	VPS16	Q9H269	839 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	INTS13	Q9NVM9	706 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	IFT80	Q9P2H3	777 aa	Predicted RBP	4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ST6GALNAC2	Q9UJ37	374 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	USP22	Q9UPT9	525 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KNSTRN	Q9Y448	316 aa		4.9	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SDK2	Q58EX2	2172 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TRGV11	A0A075B6L2	103 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ASB14	A6NK59	587 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442		J3KRW8	73 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	VWA5A	O00534	786 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SNX2	O60749	519 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PPP6R2	O75170	966 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PRKCB	P05771	671 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	DDX6	P26196	483 aa	Known RBP eCLIP	4.89	□□□□□ -1.63	2e-7	■■■□□ 18.3
ECHDC1-223	ENST00000534442	AKT1	P31749	480 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KLRC3	Q07444	240 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ACOX1	Q15067	660 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MAPRE1	Q15691	268 aa	Known RBP	4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	LINC00303	Q3SY05	128 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	INTS11	Q5TA45	600 aa	Known RBP	4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TTC22	Q5TAA0	569 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	FHL5	Q5TD97	284 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	DTX2	Q86UW9	622 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	COLGALT2	Q8IYK4	626 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	NAXE	Q8NCW5	288 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	FAM3C	Q92520	227 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	LPIN2	Q92539	896 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SDCCAG3	Q96C92	435 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MCRS1	Q96EZ8	462 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	VN1R3	Q9BXE9	311 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TEX13B	Q9BXU2	312 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ACTRT3	Q9BYD9	372 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TPSD1	Q9BZJ3	242 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	INO80B	Q9C086	356 aa	Predicted RBP	4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	FBXO28	Q9NVF7	368 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	HYPK	Q9NX55	129 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CEP72	Q9P209	647 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ADAMTS5	Q9UNA0	930 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CNTN6	Q9UQ52	1028 aa		4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	DRG1	Q9Y295	367 aa	Known RBP	4.89	□□□□□ -1.63
ECHDC1-223	ENST00000534442	WDR81	Q562E7	1941 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442		A0A1W2PRG0	241 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	EXTL3	O43909	919 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CDKL5	O76039	1030 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CXCL14	O95715	111 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CER1	O95813	267 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TK1	P04183	234 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PBX1	P40424	430 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SELENOP	P49908	381 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TUB	P50607	506 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ADAM17	P78536	824 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	GCKR	Q14397	625 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CLCA4	Q14CN2	919 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SMAD1	Q15797	465 aa	Known RBP	4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ANKRD45	Q5TZF3	282 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PMS2CL	Q68D20	193 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MSANTD2	Q6P1R3	559 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ZNF585A	Q6P3V2	769 aa		4.88	□□□□□ -1.63

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