RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 ZSWIM9Q86XI8 627 aa24.39■■□□□ 1.49
SIPA1-210ENST00000534406 SLC35B2Q8TB61 432 aa24.39■■□□□ 1.49
SIPA1-210ENST00000534406 PDCD6IPQ8WUM4 868 aaKnown RBP24.39■■□□□ 1.49
SIPA1-210ENST00000534406 ATG4AQ8WYN0 398 aa24.39■■□□□ 1.49
SIPA1-210ENST00000534406 SPOCK2Q92563 424 aa24.39■■□□□ 1.49
SIPA1-210ENST00000534406 SLC25A51Q9H1U9 297 aa24.39■■□□□ 1.49
SIPA1-210ENST00000534406 GLOD4Q9HC38 313 aa24.39■■□□□ 1.49
SIPA1-210ENST00000534406 TRHDEQ9UKU6 1024 aa24.39■■□□□ 1.49
SIPA1-210ENST00000534406 RAI2Q9Y5P3 530 aa24.39■■□□□ 1.49
SIPA1-210ENST00000534406 ATXN2Q99700 1313 aaKnown RBP24.38■■□□□ 1.49
SIPA1-210ENST00000534406 RIF1Q5UIP0 2472 aaKnown RBP24.38■■□□□ 1.49
SIPA1-210ENST00000534406 NEMP1O14524 444 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 AREL1O15033 823 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 KCNN4O15554 427 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 PCDH8O95206 1070 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 IGHV4-34P06331 123 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 ITPKAP23677 461 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 CD86P42081 329 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 ELP6Q0PNE2 266 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 UGP2Q16851 508 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 FAM182AQ5T1J6 154 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 ARMC12Q5T9G4 340 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 NEK5Q6P3R8 708 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 TRIM69Q86WT6 500 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 RGL4Q8IZJ4 473 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 ZNF567Q8N184 647 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 C17orf53Q8N3J3 647 aaPredicted RBP24.38■■□□□ 1.49
SIPA1-210ENST00000534406 BIRC7Q96CA5 298 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 FAM122AQ96E09 287 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 DNPEPQ9ULA0 475 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 SNX12Q9UMY4 172 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 ITM2BQ9Y287 266 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 RALGAPA1Q6GYQ0 2036 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 USP34Q70CQ2 3546 aa24.38■■□□□ 1.49
SIPA1-210ENST00000534406 EP300Q09472 2414 aaPredicted RBP24.37■■□□□ 1.49
SIPA1-210ENST00000534406 CFAP69A5D8W1 941 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 C10orf142B7Z368 130 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 SPINT1O43278 529 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 TSPAN6O43657 245 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 RNGTTO60942 597 aaKnown RBP24.37■■□□□ 1.49
SIPA1-210ENST00000534406 PGLSO95336 258 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 MPLP40238 635 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 POLR2LP62875 67 aaKnown RBP24.37■■□□□ 1.49
SIPA1-210ENST00000534406 LONRF2Q1L5Z9 754 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 KIAA1161Q6NSJ0 714 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 ERAP2Q6P179 960 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 SYT12Q8IV01 421 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 DNASE2BQ8WZ79 361 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 RUBCNQ92622 972 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 PIGKQ92643 395 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 IMP4Q96G21 291 aaKnown RBP24.37■■□□□ 1.49
SIPA1-210ENST00000534406 WDR24Q96S15 920 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 OSBPL9Q96SU4 736 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 HINFPQ9BQA5 517 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 TDRD1Q9BXT4 1180 aaKnown RBP24.37■■□□□ 1.49
SIPA1-210ENST00000534406 ARRDC1-AS1Q9H2J1 176 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 PCDH12Q9NPG4 1184 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 PCDHB9Q9Y5E1 797 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 FAM186AA6NE01 2351 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 TRPM6Q9BX84 2022 aa24.37■■□□□ 1.49
SIPA1-210ENST00000534406 WDR87Q6ZQQ6 2873 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 A0A1W2PQU0 124 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 LIASO43766 372 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 MMP2P08253 660 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 NFKB1P19838 968 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 HOXD12P35452 270 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 PLA2G5P39877 138 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 SKOR1P84550 965 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 SLC14A2Q15849 920 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 PEAR1Q5VY43 1037 aaPredicted RBP24.36■■□□□ 1.49
SIPA1-210ENST00000534406 ITPRIPL1Q6GPH6 555 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 PID1Q7Z2X4 250 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 ZSCAN30Q86W11 494 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 HORMAD1Q86X24 394 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 RASGEF1CQ8N431 466 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 RBM15Q96T37 977 aaKnown RBP eCLIP24.36■■□□□ 1.49
SIPA1-210ENST00000534406 NAPGQ99747 312 aaPredicted RBP24.36■■□□□ 1.49
SIPA1-210ENST00000534406 USP29Q9HBJ7 922 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 RSPH14Q9UHP6 348 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 EIF2B4Q9UI10 523 aaKnown RBP24.36■■□□□ 1.49
SIPA1-210ENST00000534406 GGT7Q9UJ14 662 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 PILRBQ9UKJ0 227 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 ZKSCAN5Q9Y2L8 839 aa24.36■■□□□ 1.49
SIPA1-210ENST00000534406 LATO43561 262 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 GFRA3O60609 400 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 NFKBIAP25963 317 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 CD27P26842 260 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 CD68P34810 354 aaPredicted RBP24.35■■□□□ 1.49
SIPA1-210ENST00000534406 NUDT1P36639 197 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 MMP12P39900 470 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 IHHQ14623 411 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 SIX1Q15475 284 aaPredicted RBP24.35■■□□□ 1.49
SIPA1-210ENST00000534406 HS1BP3Q53T59 392 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 C1orf54Q8WWF1 131 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 TRIM44Q96DX7 344 aaPredicted RBP24.35■■□□□ 1.49
SIPA1-210ENST00000534406 FEM1CQ96JP0 617 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 MIR1-1HGQ9H1L0 117 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 GBA3Q9H227 469 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 SUSD2Q9UGT4 822 aa24.35■■□□□ 1.49
SIPA1-210ENST00000534406 PHTF1Q9UMS5 762 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms