RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 IQCB1Q15051 598 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 DEFB133Q30KQ1 61 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 PRRT3Q5FWE3 981 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 CFAP58Q5T655 872 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 FAXCQ5TGI0 409 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 BRAT1Q6PJG6 821 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 SRLQ86TD4 932 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 PSTKQ8IV42 348 aaKnown RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 RBFAQ8N0V3 343 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 TP53I13Q8NBR0 393 aaPredicted RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 TSEN2Q8NCE0 465 aaKnown RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 ZNF653Q96CK0 615 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 KCTD15Q96SI1 283 aaPredicted RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 TCEAL2Q9H3H9 227 aaPredicted RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 MRPL47Q9HD33 250 aaKnown RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 PCDH12Q9NPG4 1184 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 CWC15Q9P013 229 aaKnown RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 APOBEC3BQ9UH17 382 aaKnown RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 SALL4Q9UJQ4 1053 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 COQ6Q9Y2Z9 468 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 SCINQ9Y6U3 715 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 U3KQA8 63 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 PLXNB3Q9ULL4 1909 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 TSPAN11A1L157 253 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 TOR1BO14657 336 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 TPP1O14773 563 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 RRP8O43159 456 aaKnown RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 TLX3O43711 291 aaPredicted RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 LZTS3O60299 673 aaPredicted RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 LRCH4O75427 683 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 GCATO75600 419 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 MYBL1P10243 752 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 ITPKBP27987 946 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 EIF2S3P41091 472 aaKnown RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 RGRP47804 291 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 LIG3P49916 1009 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 PEX5P50542 639 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 ZNF135P52742 658 aaPredicted RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 ADKP55263 362 aaKnown RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 PPARDQ03181 441 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 NSUN2Q08J23 767 aaKnown RBP eCLIP8.99□□□□□ -0.97
COPB1-211ENST00000534234 CDKN3Q16667 212 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 WSCD2Q2TBF2 565 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 BOLA3Q53S33 107 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 CDCP2Q5VXM1 449 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 AFMIDQ63HM1 303 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 ERAP2Q6P179 960 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 LRRC69Q6ZNQ3 347 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 ARHGAP36Q6ZRI8 547 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 CYP4V2Q6ZWL3 525 aaPredicted RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 ARHGAP12Q8IWW6 846 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 PHACTR4Q8IZ21 702 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 LZTR1Q8N653 840 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 IFI44Q8TCB0 444 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 MAPK15Q8TD08 544 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 FGF11Q92914 225 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 TRIM11Q96F44 468 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 TUBGCP5Q96RT8 1024 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 SLC13A1Q9BZW2 595 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 ISCUQ9H1K1 167 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 ATP13A3Q9H7F0 1226 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 ZWILCHQ9H900 591 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 SP110Q9HB58 689 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 NCKIPSDQ9NZQ3 722 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 PNMA8BQ9ULN7 279 aaPredicted RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 PCDHB1Q9Y5F3 818 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 ANKRD11Q6UB99 2663 aaPredicted RBP8.98□□□□□ -0.97
COPB1-211ENST00000534234 DSPP15924 2871 aaKnown RBP8.98□□□□□ -0.97
COPB1-211ENST00000534234 FAM208BQ5VWN6 2430 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 ZFYVE26Q68DK2 2539 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 EME2A4GXA9 379 aaPredicted RBP8.98□□□□□ -0.97
COPB1-211ENST00000534234 TMEM110-MUSTN1A8MSY1 372 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 LMO7DNF2Z398 122 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 YY2O15391 372 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 BRINP1O60477 761 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 USP12O75317 370 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 PRKCGP05129 697 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 ANXA6P08133 673 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 C6P13671 934 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 TSHRP16473 764 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 SERPINA4P29622 427 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 PCK1P35558 622 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 ACTN2P35609 894 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 ABCG1P45844 678 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 SCNN1BP51168 640 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 BLKP51451 505 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 POLR2LP62875 67 aaKnown RBP8.98□□□□□ -0.97
COPB1-211ENST00000534234 BCL2L1Q07817 233 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 IL10RBQ08334 325 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 INPP5AQ14642 412 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 RFTN1Q14699 578 aaPredicted RBP8.98□□□□□ -0.97
COPB1-211ENST00000534234 ACAP1Q15027 740 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 IRF4Q15306 451 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 TDRD12Q587J7 1177 aaKnown RBP8.98□□□□□ -0.97
COPB1-211ENST00000534234 FIGNQ5HY92 759 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 MACC1Q6ZN28 852 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 EFL1Q7Z2Z2 1120 aaKnown RBP8.98□□□□□ -0.97
COPB1-211ENST00000534234 RD3Q7Z3Z2 195 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 ZSWIM9Q86XI8 627 aa8.98□□□□□ -0.97
COPB1-211ENST00000534234 HID1Q8IV36 788 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms