RNA–Protein interactions for RNA: ENST00000534093.5

ROM1-205, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ROM1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-205ENST00000534093 ZRANB2O95218 330 aaKnown RBP eCLIP12.79□□□□□ -0.36
ROM1-205ENST00000534093 KRT10P13645 584 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 HNRNPA2B1P22626 353 aaKnown RBP12.79□□□□□ -0.36
ROM1-205ENST00000534093 AKT2P31751 481 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 CTSKP43235 329 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 SUOXP51687 545 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 DYNLT1P63172 113 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 KIF5AQ12840 1032 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 FGL2Q14314 439 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 LLGL1Q15334 1064 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 UGP2Q16851 508 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 BRAT1Q6PJG6 821 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 ZSCAN30Q86W11 494 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 CCDC13Q8IYE1 715 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 RCOR2Q8IZ40 523 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 TXLNBQ8N3L3 684 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 MFSD2AQ8NA29 543 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 TMEM145Q8NBT3 493 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 CCNYQ8ND76 341 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 KIAA1524Q8TCG1 905 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 ECHDC3Q96DC8 303 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 MYOCQ99972 504 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 SLC17A9Q9BYT1 436 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 GRPEL1Q9HAV7 217 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 NOD2Q9HC29 1040 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 FZD3Q9NPG1 666 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 TRIM10Q9UDY6 481 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.79□□□□□ -0.36
ROM1-205ENST00000534093 LRRK1Q38SD2 2015 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 PCNX2A6NKB5 2137 aa12.79□□□□□ -0.36
ROM1-205ENST00000534093 CNOT1A5YKK6 2376 aaKnown RBP12.78□□□□□ -0.36
ROM1-205ENST00000534093 MACROD2A1Z1Q3 448 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 GRID2IPA4D2P6 1211 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 TLR4O00206 839 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 TRAFD1O14545 582 aaPredicted RBP12.78□□□□□ -0.36
ROM1-205ENST00000534093 MMP20O60882 483 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 PAK4O96013 591 aaPredicted RBP12.78□□□□□ -0.36
ROM1-205ENST00000534093 PRKCGP05129 697 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 CCNB1P14635 433 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 CTNNA2P26232 953 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 CTNNA1P35221 906 aaKnown RBP12.78□□□□□ -0.36
ROM1-205ENST00000534093 NXPH1P58417 271 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 PPIDQ08752 370 aaKnown RBP12.78□□□□□ -0.36
ROM1-205ENST00000534093 ITKQ08881 620 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 ELP6Q0PNE2 266 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 SGCGQ13326 291 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 SLC14A1Q13336 389 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 TFDP2Q14188 446 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 PDK1Q15118 436 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 ZNF423Q2M1K9 1284 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 TMEM52BQ4KMG9 183 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 TFDP3Q5H9I0 405 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 RALGPS1Q5JS13 557 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 KAZNQ674X7 775 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 IQCHQ86VS3 1027 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 CCDC50Q8IVM0 306 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 PAF1Q8N7H5 531 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 LRRC57Q8N9N7 239 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 EXD1Q8NHP7 514 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 CXorf40AQ8TE69 158 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 RBM41Q96IZ5 413 aaKnown RBP12.78□□□□□ -0.36
ROM1-205ENST00000534093 OLFM3Q96PB7 478 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 LGMNQ99538 433 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 SEMA3CQ99985 751 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 C1QTNF2Q9BXJ5 285 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 PCDH12Q9NPG4 1184 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 RBM22Q9NW64 420 aaKnown RBP eCLIP12.78□□□□□ -0.36
ROM1-205ENST00000534093 FNDC3AQ9Y2H6 1198 aaKnown RBP12.78□□□□□ -0.36
ROM1-205ENST00000534093 PCDHGC4Q9Y5F7 938 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 PCDHA3Q9Y5H8 950 aa12.78□□□□□ -0.36
ROM1-205ENST00000534093 hCG_1818297A0A087WSY0 165 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 H0Y8X5 98 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.37
ROM1-205ENST00000534093 RAD51BO15315 384 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 ARHGAP6O43182 974 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 HTRA2O43464 458 aaPredicted RBP12.77□□□□□ -0.37
ROM1-205ENST00000534093 CST8O60676 142 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 MAGEC1O60732 1142 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 SOCS5O75159 536 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 NEBLO76041 1014 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 JCHAINP01591 159 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 HLA-DQB2P05538 268 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 ZNF883P0CG24 379 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 CD59P13987 128 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 CLDN2P57739 230 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 SEMG2Q02383 582 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 ADCY2Q08462 1091 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 AP1B1Q10567 949 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 OVGP1Q12889 678 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 TRAF2Q12933 501 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 PRAMEF14Q5SWL7 426 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 ERAP2Q6P179 960 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 GCNT7Q6ZNI0 430 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 CCDC112Q8NEF3 446 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 ASB12Q8WXK4 309 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 KLHDC7BQ96G42 594 aa12.77□□□□□ -0.37
ROM1-205ENST00000534093 LENG8Q96PV6 779 aaPredicted RBP12.77□□□□□ -0.37
ROM1-205ENST00000534093 WRAP53Q9BUR4 548 aaKnown RBP12.77□□□□□ -0.37
ROM1-205ENST00000534093 POLR1EQ9GZS1 481 aaKnown RBP12.77□□□□□ -0.37
ROM1-205ENST00000534093 GDF3Q9NR23 364 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms