RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 MRASO14807 208 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 HTRA2O43464 458 aaPredicted RBP16.75■□□□□ 0.27
CTSB-228ENST00000533455 SRP72O76094 671 aaKnown RBP16.75■□□□□ 0.27
CTSB-228ENST00000533455 CSPG5O95196 566 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 HNRNPLP14866 589 aaKnown RBP eCLIP16.75■□□□□ 0.27
CTSB-228ENST00000533455 ADRA1AP35348 466 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 C1QTNF8P60827 252 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 UBXN11Q5T124 520 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 WSCD1Q658N2 575 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 BHLHA9Q7RTU4 235 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 GPRIN1Q7Z2K8 1008 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 SPATA22Q8NHS9 363 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 USP33Q8TEY7 942 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 SGF29Q96ES7 293 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 CELF6Q96J87 481 aaKnown RBP16.75■□□□□ 0.27
CTSB-228ENST00000533455 FAM210AQ96ND0 272 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 BIRC8Q96P09 236 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 IL12RB2Q99665 862 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 SLC29A1Q99808 456 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 TMEM79Q9BSE2 394 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 FICDQ9BVA6 458 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 TKTL2Q9H0I9 626 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 WDCPQ9H6R7 721 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 GLOD4Q9HC38 313 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.75■□□□□ 0.27
CTSB-228ENST00000533455 NEMP2A6NFY4 417 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 A8MT66 165 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 BMP10O95393 424 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 CPB1P15086 417 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 PAMP19021 973 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 GEMP55040 296 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 RALGDSQ12967 914 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 PTAR1Q7Z6K3 402 aaPredicted RBP16.75■□□□□ 0.27
CTSB-228ENST00000533455 CUZD1Q86UP6 607 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 FAM35AQ86V20 835 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 GPC2Q8N158 579 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 ZMIZ2Q8NF64 920 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 RMND5BQ96G75 393 aaPredicted RBP16.75■□□□□ 0.27
CTSB-228ENST00000533455 PPP1R2P1Q96PQ5 205 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 SLC2A6Q9UGQ3 507 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 CROTQ9UKG9 612 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 FBXO5Q9UKT4 447 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 SNX13Q9Y5W8 968 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 SMIM35A0A1B0GVV1 85 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 TRIM64CA6NLI5 447 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 IPO13O94829 963 aaKnown RBP16.74■□□□□ 0.27
CTSB-228ENST00000533455 BMP2P12643 396 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 SLC12A2P55011 1212 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 FAM83EQ2M2I3 478 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 BTBD8Q5XKL5 378 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 KRT80Q6KB66 452 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 PPP4R4Q6NUP7 873 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 DHRS4L2Q6PKH6 230 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 KIAA0408Q6ZU52 694 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 IPMKQ8NFU5 416 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 ZNF512Q96ME7 567 aaPredicted RBP16.74■□□□□ 0.27
CTSB-228ENST00000533455 RANBP9Q96S59 729 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 RHOBTB2Q9BYZ6 727 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 UNKQ9C0B0 810 aaKnown RBP16.74■□□□□ 0.27
CTSB-228ENST00000533455 TNFRSF12AQ9NP84 129 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 ARMC1Q9NVT9 282 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 DUS2Q9NX74 493 aaKnown RBP16.74■□□□□ 0.27
CTSB-228ENST00000533455 LMCD1Q9NZU5 365 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 NEU3Q9UQ49 428 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 PIN4Q9Y237 131 aaKnown RBP16.74■□□□□ 0.27
CTSB-228ENST00000533455 ADM5C9JUS6 153 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 NRP2O60462 931 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 MT-CYBP00156 380 aaPredicted RBP16.74■□□□□ 0.27
CTSB-228ENST00000533455 USP17L7P0C7H9 530 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 KCNA5P22460 613 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 FGFR3P22607 806 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 ACADVLP49748 655 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 RABGGTBP53611 331 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 CSHL1Q14406 222 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 SLC14A2Q15849 920 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 NHSL2Q5HYW2 709 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 AGAP9Q5VTM2 703 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 ZNF470Q6ECI4 717 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 FASTKD5Q7L8L6 764 aaKnown RBP16.74■□□□□ 0.27
CTSB-228ENST00000533455 SULF1Q8IWU6 871 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 ANKRD13AQ8IZ07 590 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 MYO1HQ8N1T3 1032 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 FIBCD1Q8N539 461 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 PACRGLQ8N7B6 248 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 SGIP1Q9BQI5 828 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 PRKD2Q9BZL6 878 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 ENTPD7Q9NQZ7 604 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 TUBA8Q9NY65 449 aaPredicted RBP16.74■□□□□ 0.27
CTSB-228ENST00000533455 CCDC167Q9P0B6 97 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 SLC8A2Q9UPR5 921 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 FIS1Q9Y3D6 152 aa16.74■□□□□ 0.27
CTSB-228ENST00000533455 DICER1Q9UPY3 1922 aaKnown RBP16.74■□□□□ 0.27
CTSB-228ENST00000533455 HHLA1C9JL84 531 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 LTA4HP09960 611 aaKnown RBP16.73■□□□□ 0.27
CTSB-228ENST00000533455 ARSAP15289 507 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 HDCP19113 662 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 LPIN1Q14693 890 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 PPP1R3AQ16821 1122 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 KCTD21Q4G0X4 260 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 ARHGAP36Q6ZRI8 547 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms