RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ZNF605Q86T29 641 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 CACTIN-AS1Q8N1I8 211 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 TAB3Q8N5C8 712 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 GDAP1Q8TB36 358 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 GRK7Q8WTQ7 553 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 MAIP1Q8WWC4 291 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 SKA1Q96BD8 255 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 FCRL3Q96P31 734 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 SERPINB12Q96P63 405 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 WDR83Q9BRX9 315 aaKnown RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ACE2Q9BYF1 805 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ROPN1BQ9BZX4 212 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 CCDC134Q9H6E4 229 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ROPN1Q9HAT0 212 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 PRSS16Q9NQE7 514 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 FGFR1OP2Q9NVK5 253 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 MARCH2Q9P0N8 246 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 SUN2Q9UH99 717 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 PLA2G4CQ9UP65 541 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ZNF148Q9UQR1 794 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 TEX51A0A1B0GUA7 166 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 SLC12A8A0AV02 714 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 GOLGA8MH3BSY2 632 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 PIK3R2O00459 728 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ERBB2P04626 1255 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 IGHV4-34P06331 123 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 VIMP08670 466 aaKnown RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 CD19P15391 556 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 HOXD9P28356 352 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 SCTRP47872 440 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ACADVLP49748 655 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ARSEP51690 589 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 GPS1Q13098 491 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 TRIP4Q15650 581 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 CGB2Q6NT52 195 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 TRNP1Q6NT89 227 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 FBXL19Q6PCT2 694 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 CCDC121Q6ZUS5 278 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 USP30Q70CQ3 517 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 CHST9Q7L1S5 443 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 GPR155Q7Z3F1 870 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ERICH1Q86X53 443 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 SRRM1Q8IYB3 904 aaKnown RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ZNF843Q8N446 348 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 CCDC89Q8N998 374 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 TMEM35BQ8NCS4 154 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ELF4Q99607 663 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ZWILCHQ9H900 591 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ABCF3Q9NUQ8 709 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 SCML1Q9UN30 329 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 NCKAP1Q9Y2A7 1128 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 AK5Q9Y6K8 562 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 CABIN1Q9Y6J0 2220 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 A0A1W2PPC4 97 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 TCP11X1B4DZS4 312 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 DNALI1O14645 258 aaPredicted RBP8.37□□□□□ -1.07
NEDD8-207ENST00000533242 LSM8O95777 96 aaKnown RBP8.37□□□□□ -1.07
NEDD8-207ENST00000533242 CALB1P05937 261 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 ITGAVP06756 1048 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 BRAFP15056 766 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 MAGEA4P43358 317 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 SFSWAPQ12872 951 aaKnown RBP8.37□□□□□ -1.07
NEDD8-207ENST00000533242 TFDP3Q5H9I0 405 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 HES3Q5TGS1 186 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 ANKRD22Q5VYY1 191 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 RCOR2Q8IZ40 523 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 AHI1Q8N157 1196 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 SLC4A11Q8NBS3 891 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 CYB5D2Q8WUJ1 264 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 SAYSD1Q9NPB0 183 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 HAUS2Q9NVX0 235 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 PCDHGC3Q9UN70 934 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 GOLGA6L7A0A1B0GV03 622 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 TCRBV7S3A2A0A539 114 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 RASSF9O75901 435 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 LATS1O95835 1130 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 IFNB1P01574 187 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 PABPC1P11940 636 aaKnown RBP8.37□□□□□ -1.07
NEDD8-207ENST00000533242 HLA-FP30511 346 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 YWHAGP61981 247 aaKnown RBP eCLIP8.37□□□□□ -1.07
NEDD8-207ENST00000533242 SEMG2Q02383 582 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 TARDBPQ13148 414 aaKnown RBP eCLIP8.37□□□□□ -1.07
NEDD8-207ENST00000533242 ILKQ13418 452 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 SHBQ15464 509 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 ZKSCAN8Q15776 578 aaPredicted RBP8.37□□□□□ -1.07
NEDD8-207ENST00000533242 MSS51Q4VC12 460 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 RAB41Q5JT25 222 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 PPP1R26Q5T8A7 1209 aaPredicted RBP8.37□□□□□ -1.07
NEDD8-207ENST00000533242 RNASEH2BQ5TBB1 312 aaKnown RBP8.37□□□□□ -1.07
NEDD8-207ENST00000533242 MBLAC2Q68D91 279 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 ADIPOR2Q86V24 386 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 GATAD2AQ86YP4 633 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 ZNF366Q8N895 744 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 CCDC197Q8NCU1 140 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 SLC35B2Q8TB61 432 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 SAP25Q8TEE9 199 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 SPOCK2Q92563 424 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 MAML1Q92585 1016 aa8.37□□□□□ -1.07
NEDD8-207ENST00000533242 MRRFQ96E11 262 aaKnown RBP8.37□□□□□ -1.07
NEDD8-207ENST00000533242 RBM41Q96IZ5 413 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms