RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 REPS1Q96D71 796 aa8.12□□□□□ -1.11
KNL1-209ENST00000532347 CHFRQ96EP1 664 aa8.12□□□□□ -1.11
KNL1-209ENST00000532347 DDX23Q9BUQ8 820 aaKnown RBP8.12□□□□□ -1.11
KNL1-209ENST00000532347 CINPQ9BW66 212 aaPredicted RBP8.12□□□□□ -1.11
KNL1-209ENST00000532347 STX8Q9UNK0 236 aa8.12□□□□□ -1.11
KNL1-209ENST00000532347 CNTN6Q9UQ52 1028 aa8.12□□□□□ -1.11
KNL1-209ENST00000532347 GPR52Q9Y2T5 361 aa8.12□□□□□ -1.11
KNL1-209ENST00000532347 DGKBQ9Y6T7 804 aa8.12□□□□□ -1.11
KNL1-209ENST00000532347 TRIP12Q14669 1992 aaPredicted RBP8.11□□□□□ -1.11
KNL1-209ENST00000532347 KIAA1217Q5T5P2 1943 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 ABCB11O95342 1321 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 CCDC187A0A096LP49 1063 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 MBPP02686 304 aaPredicted RBP8.11□□□□□ -1.11
KNL1-209ENST00000532347 IL9P15248 144 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 MMP8P22894 467 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 GALNSP34059 522 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 PPM1FP49593 454 aaPredicted RBP8.11□□□□□ -1.11
KNL1-209ENST00000532347 ARHGAP1Q07960 439 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 TAF5Q15542 800 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 STXBP2Q15833 593 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 TMEM95Q3KNT9 176 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 EPC2Q52LR7 807 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 RAB11FIP2Q7L804 512 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 SERINC5Q86VE9 423 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 RUBCNQ92622 972 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 P2RX5Q93086 422 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 TOP1MTQ969P6 601 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 TRIM63Q969Q1 353 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 DAZAP1Q96EP5 407 aaKnown RBP8.11□□□□□ -1.11
KNL1-209ENST00000532347 SNX18Q96RF0 628 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 FAM167BQ9BTA0 163 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 VPS16Q9H269 839 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 ITM2CQ9NQX7 267 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 ASIC5Q9NY37 505 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 NFU1Q9UMS0 254 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 UBE2J1Q9Y385 318 aaPredicted RBP8.11□□□□□ -1.11
KNL1-209ENST00000532347 ZDBF2Q9HCK1 2354 aa8.11□□□□□ -1.11
KNL1-209ENST00000532347 PROB1E7EW31 1015 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 AKAP8O43823 692 aaKnown RBP8.1□□□□□ -1.11
KNL1-209ENST00000532347 CREB3O43889 395 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 STAM2O75886 525 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 GPD1P21695 349 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 PTH2RP49190 550 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 CLK3P49761 638 aaKnown RBP8.1□□□□□ -1.11
KNL1-209ENST00000532347 RAE1P78406 368 aaKnown RBP8.1□□□□□ -1.11
KNL1-209ENST00000532347 DEFB103AP81534 67 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 HOXA4Q00056 320 aaPredicted RBP8.1□□□□□ -1.11
KNL1-209ENST00000532347 RAPGEF1Q13905 1077 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 CCDC96Q2M329 555 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 TRIM72Q6ZMU5 477 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 SEPT8Q92599 483 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 NPIPB3Q92617 1050 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 KAT2BQ92831 832 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 SARAFQ96BY9 339 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 MECRQ9BV79 373 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 KCNK9Q9NPC2 374 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 VPS4AQ9UN37 437 aa8.1□□□□□ -1.11
KNL1-209ENST00000532347 LOC105369274A0A096LPK9 316 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 LOC102723532A0A0G2JNH3 316 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 RSPH10B2B2RC85 870 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 TARM1B6A8C7 271 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 M0QYT0 321 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 PRDM1O75626 825 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 JTBO76095 146 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 MMP1P03956 469 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 RSPH10BP0C881 870 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 PDHBP11177 359 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 ATF7P17544 494 aaPredicted RBP8.09□□□□□ -1.11
KNL1-209ENST00000532347 CFHR3Q02985 330 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 SF3A3Q12874 501 aaKnown RBP eCLIP8.09□□□□□ -1.11
KNL1-209ENST00000532347 GPM6BQ13491 265 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 FAM187BQ17R55 369 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 ACSM6Q6P461 480 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 C16orf89Q6UX73 402 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 OR4N4Q8N0Y3 316 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 AFG1LQ8WV93 481 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 TRAPPC9Q96Q05 1148 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 YME1L1Q96TA2 773 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 BRD8Q9H0E9 1235 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 RNF41Q9H4P4 317 aaPredicted RBP8.09□□□□□ -1.11
KNL1-209ENST00000532347 CCDC134Q9H6E4 229 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 ELAC1Q9H777 363 aaKnown RBP8.09□□□□□ -1.11
KNL1-209ENST00000532347 SAYSD1Q9NPB0 183 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 SH3BP4Q9P0V3 963 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 ISY1Q9ULR0 285 aaKnown RBP8.09□□□□□ -1.11
KNL1-209ENST00000532347 FZD4Q9ULV1 537 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 C19orf53Q9UNZ5 99 aaPredicted RBP8.09□□□□□ -1.11
KNL1-209ENST00000532347 SQORQ9Y6N5 450 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 TECTAO75443 2155 aa8.09□□□□□ -1.11
KNL1-209ENST00000532347 NLRC5Q86WI3 1866 aa8.09□□□□□ -1.12
KNL1-209ENST00000532347 MBTPS2O43462 519 aa8.08□□□□□ -1.12
KNL1-209ENST00000532347 FAM155BO75949 473 aa8.08□□□□□ -1.12
KNL1-209ENST00000532347 MT-CO3P00414 261 aa8.08□□□□□ -1.12
KNL1-209ENST00000532347 CALML3P27482 149 aa8.08□□□□□ -1.12
KNL1-209ENST00000532347 THBS4P35443 961 aa8.08□□□□□ -1.12
KNL1-209ENST00000532347 JAK3P52333 1124 aa8.08□□□□□ -1.12
KNL1-209ENST00000532347 PRKAA2P54646 552 aa8.08□□□□□ -1.12
KNL1-209ENST00000532347 ARL4CP56559 192 aa8.08□□□□□ -1.12
KNL1-209ENST00000532347 COASYQ13057 564 aa8.08□□□□□ -1.12
KNL1-209ENST00000532347 PPFIA1Q13136 1202 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms