RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 CA9Q16790 459 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 UGP2Q16851 508 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 TBC1D25Q3MII6 688 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 ANO6Q4KMQ2 910 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 PRRT3Q5FWE3 981 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 ERMARDQ5T6L9 678 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 MACC1Q6ZN28 852 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 PHACTR4Q8IZ21 702 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 MAPK15Q8TD08 544 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 CELF6Q96J87 481 aaKnown RBP15.94■□□□□ 0.14
CPSF1-205ENST00000531042 TBATAQ96M53 351 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 EIF3CQ99613 913 aaKnown RBP15.94■□□□□ 0.14
CPSF1-205ENST00000531042 BPIFA3Q9BQP9 254 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 SLC39A8Q9C0K1 460 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 DHX35Q9H5Z1 703 aaKnown RBP15.94■□□□□ 0.14
CPSF1-205ENST00000531042 TMEM63CQ9P1W3 806 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 COL27A1Q8IZC6 1860 aaPredicted RBP15.93■□□□□ 0.14
CPSF1-205ENST00000531042 CPED1A4D0V7 1026 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 EME2A4GXA9 379 aaPredicted RBP15.93■□□□□ 0.14
CPSF1-205ENST00000531042 TMEM191CA6NGB0 347 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 ARHGAP42A6NI28 874 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 LZTS3O60299 673 aaPredicted RBP15.93■□□□□ 0.14
CPSF1-205ENST00000531042 BUB1BO60566 1050 aaPredicted RBP15.93■□□□□ 0.14
CPSF1-205ENST00000531042 CSO75390 466 aaKnown RBP15.93■□□□□ 0.14
CPSF1-205ENST00000531042 TGM2P21980 687 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 PAPOLAP51003 745 aaKnown RBP15.93■□□□□ 0.14
CPSF1-205ENST00000531042 ADKP55263 362 aaKnown RBP15.93■□□□□ 0.14
CPSF1-205ENST00000531042 C1orf61Q13536 156 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 IRF4Q15306 451 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 ASIC2Q16515 512 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 GUSBP11Q6P575 273 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 EFL1Q7Z2Z2 1120 aaKnown RBP15.93■□□□□ 0.14
CPSF1-205ENST00000531042 ZNF641Q96N77 438 aaPredicted RBP15.93■□□□□ 0.14
CPSF1-205ENST00000531042 PEBP4Q96S96 227 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 KCTD15Q96SI1 283 aaPredicted RBP15.93■□□□□ 0.14
CPSF1-205ENST00000531042 SNRNP25Q9BV90 132 aaKnown RBP15.93■□□□□ 0.14
CPSF1-205ENST00000531042 LRRC61Q9BV99 259 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 BOCQ9BWV1 1114 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 SLC13A1Q9BZW2 595 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 HAUS4Q9H6D7 363 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 PCDH12Q9NPG4 1184 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 AIPL1Q9NZN9 384 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 PCSK1NQ9UHG2 260 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 COQ6Q9Y2Z9 468 aa15.93■□□□□ 0.14
CPSF1-205ENST00000531042 SMTNL1A8MU46 457 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 LMO7DNF2Z398 122 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 USP12O75317 370 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 RNF8O76064 485 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 MPOP05164 745 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 GZMAP12544 262 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 C6P13671 934 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 ERCC2P18074 760 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 RGRP47804 291 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 CSNK1DP48730 415 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 PEX5P50542 639 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 PPARDQ03181 441 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 ACAP1Q15027 740 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 LRRC14Q15048 493 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 NR0B2Q15466 257 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 WSCD2Q2TBF2 565 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 C6orf132Q5T0Z8 1188 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 FAXCQ5TGI0 409 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 AFMIDQ63HM1 303 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 BRAT1Q6PJG6 821 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 RFX8Q6ZV50 586 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 CYP4V2Q6ZWL3 525 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-205ENST00000531042 ZNF571Q7Z3V5 609 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-205ENST00000531042 CAMK1DQ8IU85 385 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 FNIP1Q8TF40 1166 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 TUBGCP5Q96RT8 1024 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 TRIM7Q9C029 511 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 CLPBQ9H078 707 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 PRORYQ9H606 182 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 RAI2Q9Y5P3 530 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 ASXL3Q9C0F0 2248 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 ANKRD36A6QL64 1941 aa15.92■□□□□ 0.14
CPSF1-205ENST00000531042 TMEM110-MUSTN1A8MSY1 372 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 YY2O15391 372 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 DAPK3O43293 454 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 PALMO75781 387 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 DXOO77932 396 aaKnown RBP15.91■□□□□ 0.14
CPSF1-205ENST00000531042 FTLP02792 175 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-205ENST00000531042 ANXA6P08133 673 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 TSHRP16473 764 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 MIPP30301 263 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 PRKCIP41743 596 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 LSSP48449 732 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 LIG3P49916 1009 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 GABREP78334 506 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 AGERQ15109 404 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 ISXQ2M1V0 245 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 FILIP1LQ4L180 1135 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 CFAP58Q5T655 872 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 E4F1Q66K89 784 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-205ENST00000531042 ERAP2Q6P179 960 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 SRLQ86TD4 932 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 ZSWIM9Q86XI8 627 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 PSTKQ8IV42 348 aaKnown RBP15.91■□□□□ 0.14
CPSF1-205ENST00000531042 ARHGAP12Q8IWW6 846 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 SLC35F3Q8IY50 421 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms