RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SNTG1Q9NSN8 517 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 C20orf141Q9NUB4 165 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 TBC1D29Q9UFV1 150 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 VPS28Q9UK41 221 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 TTLL3Q9Y4R7 772 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 KCNE2Q9Y6J6 123 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.81□□□□□ -1.64
C11orf88-204ENST00000529661 FAM90A8PA6NJQ4 464 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 LIPT2A6NK58 231 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 MDM4O15151 490 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 IFNA2P01563 188 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 EIF2S1P05198 315 aaKnown RBP4.81□□□□□ -1.64
C11orf88-204ENST00000529661 FAM90A13PP0C7W8 464 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 FAM90A24PP0C7X0 464 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 ZNF8P17098 575 aaPredicted RBP4.81□□□□□ -1.64
C11orf88-204ENST00000529661 NFKBIAP25963 317 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 KLRC2P26717 231 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 RAD52P43351 418 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 THBS3P49746 956 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 NANOS2P60321 138 aaKnown RBP4.81□□□□□ -1.64
C11orf88-204ENST00000529661 CUL4AQ13619 759 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 PKP1Q13835 747 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 EDRF1Q3B7T1 1238 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 TXNDC8Q6A555 127 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 AAGABQ6PD74 315 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 SLC46A3Q7Z3Q1 461 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 TRIM74Q86UV6 250 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 TRIM73Q86UV7 250 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 WDR5BQ86VZ2 330 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 SLC25A41Q8N5S1 370 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 OR4N2Q8NGD1 307 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 NEK9Q8TD19 979 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 GDPD5Q8WTR4 605 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 INPP5DQ92835 1189 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 INTS12Q96CB8 462 aaKnown RBP4.81□□□□□ -1.64
C11orf88-204ENST00000529661 MAP6D1Q9H9H5 199 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 SMYD2Q9NRG4 433 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 SIRT3Q9NTG7 399 aaPredicted RBP4.81□□□□□ -1.64
C11orf88-204ENST00000529661 EHD2Q9NZN4 543 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 NCKIPSDQ9NZQ3 722 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 CDH22Q9UJ99 828 aa4.81□□□□□ -1.64
C11orf88-204ENST00000529661 INTS6Q9UL03 887 aaKnown RBP4.81□□□□□ -1.64
C11orf88-204ENST00000529661 TRBV5-7A0A0A0MS05 114 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 RPS10-NUDT3A0A1W2PQS6 291 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 AGAP14A8MT82 685 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 PTGES3LE9PB15 166 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 AP3D1O14617 1153 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 TNFRSF13BO14836 293 aaPredicted RBP4.8□□□□□ -1.64
C11orf88-204ENST00000529661 KIF1CO43896 1103 aaKnown RBP4.8□□□□□ -1.64
C11orf88-204ENST00000529661 TMCC2O75069 709 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 SEC31AO94979 1220 aaKnown RBP4.8□□□□□ -1.64
C11orf88-204ENST00000529661 CDH2P19022 906 aaPredicted RBP4.8□□□□□ -1.64
C11orf88-204ENST00000529661 CCKARP32238 428 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 CENPAP49450 140 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 EFNA5P52803 228 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 YWHAZP63104 245 aaKnown RBP4.8□□□□□ -1.64
C11orf88-204ENST00000529661 OLR1P78380 273 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 NUCB1Q02818 461 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 CREB5Q02930 508 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 SLC18A2Q05940 514 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 ACVR2BQ13705 512 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 TAF11Q15544 211 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 ME3Q16798 604 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 SYTL3Q4VX76 610 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 WASHC2DQ5SRD0 308 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 SERTAD4-AS1Q5TG53 156 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 NCEH1Q6PIU2 408 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 FAM83HQ6ZRV2 1179 aaPredicted RBP4.8□□□□□ -1.64
C11orf88-204ENST00000529661 GALNT5Q7Z7M9 940 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 IGFN1Q86VF2 1251 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 TMEM116Q8NCL8 245 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 CMASQ8NFW8 434 aaPredicted RBP4.8□□□□□ -1.64
C11orf88-204ENST00000529661 CADM4Q8NFZ8 388 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 ARHGEF2Q92974 986 aaKnown RBP4.8□□□□□ -1.64
C11orf88-204ENST00000529661 LYZL4Q96KX0 146 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 MARK4Q96L34 752 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 H2AFJQ9BTM1 129 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 STRA6Q9BX79 667 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 SYNCQ9H7C4 482 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 SCPEP1Q9HB40 452 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 PNRC2Q9NPJ4 139 aaKnown RBP4.8□□□□□ -1.64
C11orf88-204ENST00000529661 LIMA1Q9UHB6 759 aaKnown RBP4.8□□□□□ -1.64
C11orf88-204ENST00000529661 CORO1CQ9ULV4 474 aaPredicted RBP4.8□□□□□ -1.64
C11orf88-204ENST00000529661 A4GNTQ9UNA3 340 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 INSL5Q9Y5Q6 135 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 CAPN7Q9Y6W3 813 aa4.8□□□□□ -1.64
C11orf88-204ENST00000529661 FAM237BA0A1B0GVD1 139 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 CBY3A6NI87 242 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 VILLO15195 856 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 RNMTO43148 476 aaKnown RBP4.79□□□□□ -1.64
C11orf88-204ENST00000529661 SMAD6O43541 496 aaKnown RBP4.79□□□□□ -1.64
C11orf88-204ENST00000529661 AHCYL1O43865 530 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 PAGE4O60829 102 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 RARGP13631 454 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 SLC2A4P14672 509 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 PORP16435 677 aaPredicted RBP4.79□□□□□ -1.64
C11orf88-204ENST00000529661 PTPN2P17706 415 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 SLC16A2P36021 539 aa4.79□□□□□ -1.64
C11orf88-204ENST00000529661 PBX3P40426 434 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms