RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 PRPF18Q99633 342 aaKnown RBP7.51□□□□□ -1.21
C11orf54-207ENST00000528288 MRPL46Q9H2W6 279 aaKnown RBP7.51□□□□□ -1.21
C11orf54-207ENST00000528288 EFCAB1Q9HAE3 211 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 DMAP1Q9NPF5 467 aaPredicted RBP7.51□□□□□ -1.21
C11orf54-207ENST00000528288 PRG3Q9Y2Y8 225 aaPredicted RBP7.51□□□□□ -1.21
C11orf54-207ENST00000528288 AAR2Q9Y312 384 aaKnown RBP7.51□□□□□ -1.21
C11orf54-207ENST00000528288 TSC2P49815 1807 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 A8MT66 165 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 MATN3O15232 486 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 TPST1O60507 370 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 GPC4O75487 556 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 UGT1A6P19224 532 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 CHRM3P20309 590 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 PSME3P61289 254 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 TRIM32Q13049 653 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.51□□□□□ -1.21
C11orf54-207ENST00000528288 CUZD1Q86UP6 607 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 SPPL2BQ8TCT7 592 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 PSMG2Q969U7 264 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 C3orf30Q96M34 536 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 SERPINI1Q99574 410 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 SYT17Q9BSW7 474 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 DDX18Q9NVP1 670 aaKnown RBP7.51□□□□□ -1.21
C11orf54-207ENST00000528288 PADI3Q9ULW8 664 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 MYLKQ15746 1914 aa7.51□□□□□ -1.21
C11orf54-207ENST00000528288 FBP2O00757 339 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ANXA9O76027 345 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 CES1P23141 567 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 CCNCP24863 283 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 CCR1P32246 355 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 INHBEP58166 350 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 USP46P62068 366 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ECT2LQ008S8 904 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 EFEMP1Q12805 493 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 FASTKQ14296 549 aaKnown RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 GALNT3Q14435 633 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 PTPRRQ15256 657 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 PSMD5Q16401 504 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 OGFRL1Q5TC84 451 aaPredicted RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 PIK3R6Q5UE93 754 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 METTL21CQ5VZV1 264 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 SPRYD7Q5W111 196 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 SCIMPQ6UWF3 145 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ANKRD23Q86SG2 305 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ADGRG6Q86SQ4 1221 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 SPATA2LQ8IUW3 424 aaPredicted RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 DCBLD1Q8N8Z6 715 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 BLOC1S5Q8TDH9 187 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 MYEOVQ96EZ4 313 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 NSUN5Q96P11 429 aaKnown RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 TRAPPC9Q96Q05 1148 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 FCRL5Q96RD9 977 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 VAT1Q99536 393 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 SH3GL3Q99963 347 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ADAM2Q99965 735 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 CENPKQ9BS16 269 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 NOL6Q9H6R4 1146 aaKnown RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 SLC38A7Q9NVC3 462 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 LZTS1Q9Y250 596 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ANKRD6Q9Y2G4 727 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 PDE4DIPQ5VU43 2346 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 SCAMP3O14828 347 aaKnown RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ODC1P11926 461 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ADRA1AP35348 466 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 COG7P83436 770 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ROR2Q01974 943 aaKnown RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 BIRC2Q13490 618 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ADGRE1Q14246 886 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 FAM83EQ2M2I3 478 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 RALGAPA2Q2PPJ7 1873 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 PLA2G4EQ3MJ16 856 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 CD300LGQ6UXG3 332 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 RBM44Q6ZP01 1051 aaKnown RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 METTL23Q86XA0 190 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 TMEM86AQ8N2M4 240 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 PDCD6IPQ8WUM4 868 aaKnown RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ESAMQ96AP7 390 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 PGAP3Q96FM1 320 aaPredicted RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 TBATAQ96M53 351 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 RIMS3Q9UJD0 308 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 BTRCQ9Y297 605 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 SNX13Q9Y5W8 968 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ARL5AQ9Y689 179 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 PTCH2Q9Y6C5 1203 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 A0A1B0GTL3 188 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 FAM149AA5PLN7 773 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 PRORSD1PA6NEY8 169 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 NCF1BA6NI72 391 aaPredicted RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 ZNF839A8K0R7 811 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 NCF1CA8MVU1 366 aaPredicted RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 UBDO15205 165 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 SMIM18P0DKX4 95 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 NCF1P14598 390 aaPredicted RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 PRDX6P30041 224 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 RAB27AP51159 221 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 GEMP55040 296 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 FOXA1P55317 472 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 MYBPC1Q00872 1141 aa7.5□□□□□ -1.21
C11orf54-207ENST00000528288 CAPRIN1Q14444 709 aaKnown RBP7.5□□□□□ -1.21
C11orf54-207ENST00000528288 TAF1CQ15572 869 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms