RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 CNDP2Q96KP4 475 aaKnown RBP9.71□□□□□ -0.86
CHD7-208ENST00000528280 BMFQ96LC9 184 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 KCTD15Q96SI1 283 aaPredicted RBP9.71□□□□□ -0.86
CHD7-208ENST00000528280 DUSP23Q9BVJ7 150 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 CINPQ9BW66 212 aaPredicted RBP9.71□□□□□ -0.86
CHD7-208ENST00000528280 CALN1Q9BXU9 219 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 KLC2Q9H0B6 622 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 PDFQ9HBH1 243 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 USP29Q9HBJ7 922 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 GPATCH2LQ9NWQ4 482 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 KCTD5Q9NXV2 234 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 NCKIPSDQ9NZQ3 722 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 SEPT3Q9UH03 358 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 BTBD3Q9Y2F9 522 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 ACTL7AQ9Y615 435 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 CSNK1G3Q9Y6M4 447 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 CABIN1Q9Y6J0 2220 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 KNL1Q8NG31 2342 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 SPTY2D1-AS1A0A0U1RR47 76 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 GOLGA8CPA6NN73 597 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 AKR1B10O60218 316 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 KRT7P08729 469 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 RARAP10276 462 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 KRT10P13645 584 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 CES1P23141 567 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 DGKAP23743 735 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 GKP32189 559 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 EIF4A3P38919 411 aaKnown RBP9.7□□□□□ -0.86
CHD7-208ENST00000528280 ARHGAP25P42331 645 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 SSR1P43307 286 aaKnown RBP9.7□□□□□ -0.86
CHD7-208ENST00000528280 DUSP3P51452 185 aaPredicted RBP9.7□□□□□ -0.86
CHD7-208ENST00000528280 THOP1P52888 689 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 CDH6P55285 790 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 AP1S1P61966 158 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 KRT81Q14533 505 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 LBRQ14739 615 aaKnown RBP9.7□□□□□ -0.86
CHD7-208ENST00000528280 PDK2Q15119 407 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 GATAD2AQ86YP4 633 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 NDUFAF2Q8N183 169 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 CACTIN-AS1Q8N1I8 211 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 PNPLA1Q8N8W4 532 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 KCTD6Q8NC69 237 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 OR13H1Q8NG92 308 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 ATL2Q8NHH9 583 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 HSPH1Q92598 858 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 CENPTQ96BT3 561 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 CELF6Q96J87 481 aaKnown RBP9.7□□□□□ -0.86
CHD7-208ENST00000528280 CCDC42Q96M95 316 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 PSKH2Q96QS6 385 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 PEBP4Q96S96 227 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 DNAJC7Q99615 494 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 TRIM7Q9C029 511 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 IGSF5Q9NSI5 407 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.7□□□□□ -0.86
CHD7-208ENST00000528280 CTTNBP2NLQ9P2B4 639 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 LHX3Q9UBR4 397 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 KLK13Q9UKR3 277 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 NYNRINQ9P2P1 1898 aaKnown RBP9.7□□□□□ -0.86
CHD7-208ENST00000528280 PLXNB3Q9ULL4 1909 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 ASXL3Q9C0F0 2248 aa9.7□□□□□ -0.86
CHD7-208ENST00000528280 UNC79Q9P2D8 2635 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 TSPAN11A1L157 253 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 RNF103O00237 685 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 SCAMP1O15126 338 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 MMP20O60882 483 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 PLXNA2O75051 1894 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 RFPL3O75679 317 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 CSF2P04141 144 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 AMPD1P23109 780 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 HTR1BP28222 390 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 HNF1BP35680 557 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 ABL2P42684 1182 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 SCNN1BP51168 640 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 BLKP51451 505 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 CLDN2P57739 230 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 PFN3P60673 137 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 LRRC14Q15048 493 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 AGERQ15109 404 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 SMAD1Q15797 465 aaKnown RBP9.69□□□□□ -0.86
CHD7-208ENST00000528280 COL28A1Q2UY09 1125 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 MARC1Q5VT66 337 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 TIGD7Q6NT04 549 aaPredicted RBP9.69□□□□□ -0.86
CHD7-208ENST00000528280 GCNT7Q6ZNI0 430 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 CYP4V2Q6ZWL3 525 aaPredicted RBP9.69□□□□□ -0.86
CHD7-208ENST00000528280 KANSL1Q7Z3B3 1105 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 PTAR1Q7Z6K3 402 aaPredicted RBP9.69□□□□□ -0.86
CHD7-208ENST00000528280 PARGQ86W56 976 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 CNGA4Q8IV77 575 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 ARHGAP12Q8IWW6 846 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 SDR16C5Q8N3Y7 309 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 PDCD7Q8N8D1 485 aaKnown RBP9.69□□□□□ -0.86
CHD7-208ENST00000528280 TSEN2Q8NCE0 465 aaKnown RBP9.69□□□□□ -0.86
CHD7-208ENST00000528280 OR4C6Q8NH72 309 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 ZNF564Q8TBZ8 553 aaPredicted RBP9.69□□□□□ -0.86
CHD7-208ENST00000528280 FAM71BQ8TC56 605 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 TSC1Q92574 1164 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 GLMNQ92990 594 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 TBATAQ96M53 351 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 CSPG4P5Q96PW8 444 aa9.69□□□□□ -0.86
CHD7-208ENST00000528280 KLF6Q99612 283 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms