RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PEX11BO96011 259 aa33.35■■■□□ 2.93
SSSCA1-205ENST00000527920 PROS1P07225 676 aa33.35■■■□□ 2.93
SSSCA1-205ENST00000527920 SSR1P43307 286 aaKnown RBP33.35■■■□□ 2.93
SSSCA1-205ENST00000527920 LRRC73Q5JTD7 316 aa33.35■■■□□ 2.93
SSSCA1-205ENST00000527920 SPOCK2Q92563 424 aa33.35■■■□□ 2.93
SSSCA1-205ENST00000527920 ZNF670Q9BS34 389 aa33.35■■■□□ 2.93
SSSCA1-205ENST00000527920 SPEGQ15772 3267 aa33.34■■■□□ 2.93
SSSCA1-205ENST00000527920 SPTY2D1-AS1A0A0U1RR47 76 aa33.34■■■□□ 2.93
SSSCA1-205ENST00000527920 KRT7P08729 469 aa33.34■■■□□ 2.93
SSSCA1-205ENST00000527920 PFN3P60673 137 aa33.34■■■□□ 2.93
SSSCA1-205ENST00000527920 SLC10A7Q0GE19 358 aa33.34■■■□□ 2.93
SSSCA1-205ENST00000527920 DPYSL3Q14195 570 aa33.34■■■□□ 2.93
SSSCA1-205ENST00000527920 PDK2Q15119 407 aa33.34■■■□□ 2.93
SSSCA1-205ENST00000527920 ERAP2Q6P179 960 aa33.34■■■□□ 2.93
SSSCA1-205ENST00000527920 ATPAF2Q8N5M1 289 aa33.34■■■□□ 2.93
SSSCA1-205ENST00000527920 EID2Q8N6I1 236 aa33.34■■■□□ 2.93
SSSCA1-205ENST00000527920 CNDP2Q96KP4 475 aaKnown RBP33.34■■■□□ 2.93
SSSCA1-205ENST00000527920 PCDH12Q9NPG4 1184 aa33.34■■■□□ 2.93
SSSCA1-205ENST00000527920 TMEM8BA6NDV4 472 aa33.33■■■□□ 2.93
SSSCA1-205ENST00000527920 AKR1B15C9JRZ8 316 aaPredicted RBP33.33■■■□□ 2.93
SSSCA1-205ENST00000527920 TOR1BO14657 336 aa33.33■■■□□ 2.93
SSSCA1-205ENST00000527920 ENC1O14682 589 aa33.33■■■□□ 2.93
SSSCA1-205ENST00000527920 MUSKO15146 869 aa33.33■■■□□ 2.93
SSSCA1-205ENST00000527920 MMP20O60882 483 aa33.33■■■□□ 2.93
SSSCA1-205ENST00000527920 BCL2L1Q07817 233 aa33.33■■■□□ 2.93
SSSCA1-205ENST00000527920 ATP8A1Q9Y2Q0 1164 aa33.33■■■□□ 2.93
SSSCA1-205ENST00000527920 CFAP69A5D8W1 941 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 C1QTNF9BB2RNN3 333 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 RIOK3O14730 519 aaKnown RBP33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 CD48P09326 243 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 C1SP09871 688 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 C1QTNF9P0C862 333 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 CDK4P11802 303 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 DGKAP23743 735 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 MMP12P39900 470 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 FZD2Q14332 565 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 ZNF235Q14590 738 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 PARGQ86W56 976 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 MAP7D3Q8IWC1 876 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 RHOT2Q8IXI1 618 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 BBS5Q8N3I7 341 aa33.32■■■□□ 2.92
SSSCA1-205ENST00000527920 ARID1BQ8NFD5 2236 aaPredicted RBP33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 FRYQ5TBA9 3013 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 TRAFD1O14545 582 aaPredicted RBP33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 PIAS2O75928 621 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 MTA2O94776 668 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 ITIH2P19823 946 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 CR2P20023 1033 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 SCNN1BP51168 640 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 TAS2R40P59535 323 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 POLR2LP62875 67 aaKnown RBP33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 MMRN1Q13201 1228 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 PAFAH1B3Q15102 231 aaKnown RBP33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 AGERQ15109 404 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 ST3GAL2Q16842 350 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 RALGPS1Q5JS13 557 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 TMPRSS7Q7RTY8 843 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 ZSWIM9Q86XI8 627 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 CPNE8Q86YQ8 564 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 SLC25A45Q8N413 288 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 KCTD6Q8NC69 237 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 SLC35G2Q8TBE7 412 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 NSMCE1Q8WV22 266 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 FAF2Q96CS3 445 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 MGME1Q9BQP7 344 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 WRAP53Q9BUR4 548 aaKnown RBP33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 TRIM5Q9C035 493 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 SPTLC3Q9NUV7 552 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 INTUQ9ULD6 942 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 USP24Q9UPU5 2620 aa33.31■■■□□ 2.92
SSSCA1-205ENST00000527920 SDC3O75056 442 aa33.3■■■□□ 2.92
SSSCA1-205ENST00000527920 ARHGAP25P42331 645 aa33.3■■■□□ 2.92
SSSCA1-205ENST00000527920 HNRNPKP61978 463 aaKnown RBP eCLIP33.3■■■□□ 2.926e-6■■■□□ 16.3
SSSCA1-205ENST00000527920 YPEL5P62699 121 aa33.3■■■□□ 2.92
SSSCA1-205ENST00000527920 ATP13A4Q4VNC1 1196 aa33.3■■■□□ 2.92
SSSCA1-205ENST00000527920 CCNI2Q6ZMN8 369 aaPredicted RBP33.3■■■□□ 2.92
SSSCA1-205ENST00000527920 KDF1Q8NAX2 398 aaPredicted RBP33.3■■■□□ 2.92
SSSCA1-205ENST00000527920 TP53I13Q8NBR0 393 aaPredicted RBP33.3■■■□□ 2.92
SSSCA1-205ENST00000527920 NUDCD1Q96RS6 583 aa33.3■■■□□ 2.92
SSSCA1-205ENST00000527920 IGF2RP11717 2491 aa33.3■■■□□ 2.92
SSSCA1-205ENST00000527920 CACNA1BQ00975 2339 aa33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 A0A1W2PQ67 120 aa33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 GOLGA8CPA6NN73 597 aa33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 CSF2P04141 144 aa33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 NME1P15531 152 aaKnown RBP33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 IGFALSP35858 605 aa33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 ZNF211Q13398 564 aaPredicted RBP33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 TCEAL1Q15170 157 aa33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 NCBP2-AS2Q69YL0 99 aa33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 GALNT15Q8N3T1 639 aa33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 OR4C6Q8NH72 309 aa33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 PCDH19Q8TAB3 1148 aa33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 RFFLQ8WZ73 363 aa33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 FATE1Q969F0 183 aa33.29■■■□□ 2.92
SSSCA1-205ENST00000527920 SOCS5O75159 536 aa33.28■■■□□ 2.92
SSSCA1-205ENST00000527920 GJC1P36383 396 aa33.28■■■□□ 2.92
SSSCA1-205ENST00000527920 ACADVLP49748 655 aa33.28■■■□□ 2.92
SSSCA1-205ENST00000527920 GALNT2Q10471 571 aa33.28■■■□□ 2.92
SSSCA1-205ENST00000527920 PDE1CQ14123 709 aaPredicted RBP33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms