RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 NUDT2P50583 147 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 GAD2Q05329 585 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 PPIDQ08752 370 aaKnown RBP15.18■□□□□ 0.02
USP47-207ENST00000527733 ZFP14Q9HCL3 533 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 GIMAP4Q9NUV9 329 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 AURKCQ9UQB9 309 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 UBDO15205 165 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 ADAMTS4O75173 837 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 ALDH1A2O94788 518 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 ELFN1P0C7U0 828 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 NCBP2-AS2Q69YL0 99 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 RBFAQ8N0V3 343 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 ZNF784Q8NCA9 323 aaPredicted RBP15.18■□□□□ 0.02
USP47-207ENST00000527733 ELMO1Q92556 727 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 SLCO2A1Q92959 643 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 SIKE1Q9BRV8 207 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 GRHL1Q9NZI5 618 aa15.18■□□□□ 0.02
USP47-207ENST00000527733 C5orf58C9J3I9 102 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 RPP40O75818 363 aaKnown RBP15.17■□□□□ 0.02
USP47-207ENST00000527733 MT-CO1P00395 513 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 CMTR2Q8IYT2 770 aaKnown RBP15.17■□□□□ 0.02
USP47-207ENST00000527733 MED8Q96G25 268 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 EIF2B3Q9NR50 452 aaKnown RBP15.17■□□□□ 0.02
USP47-207ENST00000527733 SNX15Q9NRS6 342 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 PCDHGC4Q9Y5F7 938 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 DDX60LQ5H9U9 1706 aaKnown RBP15.17■□□□□ 0.02
USP47-207ENST00000527733 KATNA1O75449 491 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 ERFP50548 548 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 WDTC1Q8N5D0 677 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 CCDC138Q96M89 665 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 TMEM209Q96SK2 561 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 ACE2Q9BYF1 805 aaPredicted RBP15.17■□□□□ 0.02
USP47-207ENST00000527733 OPTCQ9UBM4 332 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 SOX13Q9UN79 622 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 PIGNO95427 931 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 POP4O95707 220 aaKnown RBP15.17■□□□□ 0.02
USP47-207ENST00000527733 KCNQ1P51787 676 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 CAP1Q01518 475 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 FAM151BQ6UXP7 276 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 MILR1Q7Z6M3 343 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 LCA5Q86VQ0 697 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 POF1BQ8WVV4 589 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 ACDQ96AP0 544 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 RBBP8Q99708 897 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 POLG2Q9UHN1 485 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 TMEM59LQ9UK28 342 aa15.17■□□□□ 0.02
USP47-207ENST00000527733 ANXA5P08758 320 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 SEMA5AQ13591 1074 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 FASTKD3Q14CZ7 662 aaKnown RBP15.16■□□□□ 0.02
USP47-207ENST00000527733 PFKFB4Q16877 469 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 OR10T2Q8NGX3 314 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 STYXQ8WUJ0 223 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 KCTD4Q8WVF5 259 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 KLC4Q9NSK0 619 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 LAMA4Q16363 1823 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 EDN1P05305 212 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 DGKGP49619 791 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 RFTN1Q14699 578 aaPredicted RBP15.16■□□□□ 0.02
USP47-207ENST00000527733 INSCQ1MX18 579 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 AASDHQ4L235 1098 aaPredicted RBP15.16■□□□□ 0.02
USP47-207ENST00000527733 MAGEC3Q8TD91 643 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 SKA1Q96BD8 255 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 MRPL57Q9BQC6 102 aaKnown RBP15.16■□□□□ 0.02
USP47-207ENST00000527733 HS3ST4Q9Y661 456 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 LY75O60449 1722 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.16■□□□□ 0.02
USP47-207ENST00000527733 USP1O94782 785 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 FTH1P02794 183 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 PRNPP04156 253 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 C11orf96Q7Z7L8 435 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 KBTBD7Q8WVZ9 684 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 MFSD3Q96ES6 412 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 ILVBLA1L0T0 632 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 DDX6P26196 483 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP47-207ENST00000527733 ATP6V0D1P61421 351 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 ZDHHC20Q5W0Z9 365 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 MFSD5Q6N075 450 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 MARK2Q7KZI7 788 aaKnown RBP15.16■□□□□ 0.02
USP47-207ENST00000527733 CEP70Q8NHQ1 597 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 FCRL5Q96RD9 977 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 HGH1Q9BTY7 390 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 YIPF2Q9BWQ6 316 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 TNKS2Q9H2K2 1166 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 HAO1Q9UJM8 370 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 FBXO10Q9UK96 956 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 TCAF1Q9Y4C2 921 aa15.16■□□□□ 0.02
USP47-207ENST00000527733 PRMT5O14744 637 aaPredicted RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 MAGEC1O60732 1142 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 METTL18O95568 372 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 DNTTP04053 509 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 GJA1P17302 382 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 TCN1P20061 433 aaPredicted RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 CYLC2Q14093 348 aaPredicted RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 TRPV1Q8NER1 839 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 TMEM174Q8WUU8 243 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 RXFP1Q9HBX9 757 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 TDRKHQ9Y2W6 561 aaKnown RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 FCF1Q9Y324 198 aaKnown RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 OAZ2O95190 189 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms