RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 NSUN2Q08J23 767 aaKnown RBP eCLIP15.46■□□□□ 0.07
USH1C-207ENST00000527720 ELAVL2Q12926 359 aaKnown RBP15.46■□□□□ 0.07
USH1C-207ENST00000527720 TECRLQ5HYJ1 363 aa15.46■□□□□ 0.07
USH1C-207ENST00000527720 CILP2Q8IUL8 1156 aa15.46■□□□□ 0.07
USH1C-207ENST00000527720 DEFB107AQ8IZN7 70 aa15.46■□□□□ 0.07
USH1C-207ENST00000527720 TTC9BQ8N6N2 239 aa15.46■□□□□ 0.07
USH1C-207ENST00000527720 RP9Q8TA86 221 aaKnown RBP15.46■□□□□ 0.07
USH1C-207ENST00000527720 RPRD1AQ96P16 312 aaPredicted RBP15.46■□□□□ 0.07
USH1C-207ENST00000527720 ZNF385DQ9H6B1 395 aa15.46■□□□□ 0.07
USH1C-207ENST00000527720 NDE1Q9NXR1 346 aa15.46■□□□□ 0.07
USH1C-207ENST00000527720 MRPL42Q9Y6G3 142 aaKnown RBP15.46■□□□□ 0.07
USH1C-207ENST00000527720 GOLGA8QA0A0J9YX86 632 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 LOC100653049A0A140TA62 436 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 SLC12A8A0AV02 714 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 GOLGA8OA6NCC3 632 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 GOLGA8NF8WBI6 632 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 KRT34O76011 436 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 ALDH2P05091 517 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 LTA4HP09960 611 aaKnown RBP15.46■□□□□ 0.06
USH1C-207ENST00000527720 ZDHHC11BP0C7U3 371 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 PIK3R1P27986 724 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 ABL2P42684 1182 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 PGGT1BP53609 377 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 MRPS35P82673 323 aaKnown RBP15.46■□□□□ 0.06
USH1C-207ENST00000527720 PFKPQ01813 784 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 SATB1Q01826 763 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 LBRQ14739 615 aaKnown RBP15.46■□□□□ 0.06
USH1C-207ENST00000527720 HERC3Q15034 1050 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 SIRPB2Q5JXA9 342 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 RASIP1Q5U651 963 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 LRRC8DQ7L1W4 858 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 ZNF354CQ86Y25 554 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 MIB1Q86YT6 1006 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 KIRREL3Q8IZU9 778 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 FBXW8Q8N3Y1 598 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 FAR2Q96K12 515 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 ZNF599Q96NL3 588 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 LENG8Q96PV6 779 aaPredicted RBP15.46■□□□□ 0.06
USH1C-207ENST00000527720 GPR62Q9BZJ7 368 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 POLR1EQ9GZS1 481 aaKnown RBP15.46■□□□□ 0.06
USH1C-207ENST00000527720 WDR55Q9H6Y2 383 aaPredicted RBP15.46■□□□□ 0.06
USH1C-207ENST00000527720 S100A14Q9HCY8 104 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 UXTQ9UBK9 157 aaPredicted RBP15.46■□□□□ 0.06
USH1C-207ENST00000527720 PRPF19Q9UMS4 504 aaKnown RBP15.46■□□□□ 0.06
USH1C-207ENST00000527720 PCDHB7Q9Y5E2 793 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 WASF2Q9Y6W5 498 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 ANKRD36A6QL64 1941 aa15.46■□□□□ 0.06
USH1C-207ENST00000527720 A0A1W2PQ45 241 aaPredicted RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 A0A1W2PQY0 241 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 H7C4K7 107 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 TBC1D4O60343 1298 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 TBX18O95935 607 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 EPOP01588 193 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 HOXB8P17481 243 aaPredicted RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 HLA-DPA1P20036 260 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 MTTPP55157 894 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 ACVR1Q04771 509 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 TBL3Q12788 808 aaKnown RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 ACAP2Q15057 778 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 C5orf22Q49AR2 442 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 RBM20Q5T481 1227 aaKnown RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 ANO7Q6IWH7 933 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 KDM1BQ8NB78 822 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 TXNDC5Q8NBS9 432 aaKnown RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 FEM1CQ96JP0 617 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 MAELQ96JY0 434 aaKnown RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 UBXN10Q96LJ8 280 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 CDK5RAP1Q96SZ6 601 aaKnown RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 ZNF184Q99676 751 aaPredicted RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 NUF2Q9BZD4 464 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 POMKQ9H5K3 350 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 STARD7Q9NQZ5 370 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 CORO1CQ9ULV4 474 aaPredicted RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 BPTFQ12830 3046 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 GBF1Q92538 1859 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 PRAMEF11O60813 436 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 PENKP01210 267 aaPredicted RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 FGF1P05230 155 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 ATXN1LP0C7T5 689 aaKnown RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 SELPP16109 830 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 EPHA3P29320 983 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 OR1E1P30953 314 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 CCR10P46092 362 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 GALNT1Q10472 559 aaPredicted RBP15.45■□□□□ 0.06
USH1C-207ENST00000527720 CSHL1Q14406 222 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 MGAT5BQ3V5L5 792 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 SH2D4BQ5SQS7 431 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 IRGCQ6NXR0 463 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 C16orf89Q6UX73 402 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 TRIM67Q6ZTA4 783 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 SLC22A9Q8IVM8 553 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 PGBD5Q8N414 524 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 AFAP1L2Q8N4X5 818 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 CCNYL1Q8N7R7 359 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 GPR152Q8TDT2 470 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 FAM136AQ96C01 138 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 MIEF2Q96C03 454 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 CEP295NLQ96MC4 621 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 CASD1Q96PB1 797 aa15.45■□□□□ 0.06
USH1C-207ENST00000527720 OLFM1Q99784 485 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms