RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 STEAP4Q687X5 459 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 TRMT10BQ6PF06 316 aaKnown RBP18.98■□□□□ 0.63
SMPD1-203ENST00000527275 CYS1Q717R9 158 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 SPATA22Q8NHS9 363 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 GDAP1Q8TB36 358 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 CKAP2Q8WWK9 683 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 NAT9Q9BTE0 207 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 SSU72Q9NP77 194 aaKnown RBP18.98■□□□□ 0.63
SMPD1-203ENST00000527275 MOCS1Q9NZB8 636 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 UBP1Q9NZI7 540 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 FAM159BA6NKW6 160 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 PRRT4C9JH25 899 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 USP12O75317 370 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 MT-CYBP00156 380 aaPredicted RBP18.97■□□□□ 0.63
SMPD1-203ENST00000527275 MT-ND3P03897 115 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 POLR2EP19388 210 aaKnown RBP18.97■□□□□ 0.63
SMPD1-203ENST00000527275 ECT2LQ008S8 904 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 GRAMD4Q6IC98 578 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 SFTPA1Q8IWL2 248 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 BBS5Q8N3I7 341 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 PHTF2Q8N3S3 785 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 DENND1AQ8TEH3 1009 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 TTC17Q96AE7 1141 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 SYBUQ9NX95 663 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 SLCO3A1Q9UIG8 710 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 ZNF180Q9UJW8 692 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 HS3ST2Q9Y278 367 aa18.97■□□□□ 0.63
SMPD1-203ENST00000527275 TYROBPO43914 113 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 FAM155BO75949 473 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 VIMP08670 466 aaKnown RBP18.96■□□□□ 0.63
SMPD1-203ENST00000527275 PGAM1P18669 254 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 CA4P22748 312 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 RGRP47804 291 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 DSC2Q02487 901 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 SULT2A1Q06520 285 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 SLC20A2Q08357 652 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 RNF135Q8IUD6 432 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 LRRC34Q8IZ02 419 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 DNAAF3Q8N9W5 541 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 TERB1Q8NA31 727 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 CYB5D2Q8WUJ1 264 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 OXNAD1Q96HP4 312 aaPredicted RBP18.96■□□□□ 0.63
SMPD1-203ENST00000527275 FCRL5Q96RD9 977 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 MGME1Q9BQP7 344 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 POLR1EQ9GZS1 481 aaKnown RBP18.96■□□□□ 0.63
SMPD1-203ENST00000527275 CASS4Q9NQ75 786 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 ALDH1A2O94788 518 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 RPA3P35244 121 aaPredicted RBP18.96■□□□□ 0.63
SMPD1-203ENST00000527275 WDR4P57081 412 aaKnown RBP18.96■□□□□ 0.63
SMPD1-203ENST00000527275 NIPAL4Q0D2K0 466 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 ARRDC2Q8TBH0 407 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 SEMA3CQ99985 751 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 SLC25A51Q9H1U9 297 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 FBRSL1Q9HCM7 1045 aaKnown RBP18.96■□□□□ 0.63
SMPD1-203ENST00000527275 BFARQ9NZS9 450 aa18.96■□□□□ 0.63
SMPD1-203ENST00000527275 TBC1D3BA6NDS4 549 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 PSMD3O43242 534 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 NARSO43776 548 aaKnown RBP18.95■□□□□ 0.62
SMPD1-203ENST00000527275 SRCP12931 536 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 EIF2DP41214 584 aaKnown RBP18.95■□□□□ 0.62
SMPD1-203ENST00000527275 IL9RQ01113 521 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 IHHQ14623 411 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 LGSNQ5TDP6 509 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 WFIKKN2Q8TEU8 576 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 ALKBH8Q96BT7 664 aaKnown RBP18.95■□□□□ 0.62
SMPD1-203ENST00000527275 IMP4Q96G21 291 aaKnown RBP18.95■□□□□ 0.62
SMPD1-203ENST00000527275 KLF6Q99612 283 aaPredicted RBP18.95■□□□□ 0.62
SMPD1-203ENST00000527275 PAIP2Q9BPZ3 127 aaKnown RBP18.95■□□□□ 0.62
SMPD1-203ENST00000527275 LRRC40Q9H9A6 602 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 TRPV5Q9NQA5 729 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 ELOVL2Q9NXB9 296 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 SLC25A13Q9UJS0 675 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 KIAA1549LQ6ZVL6 1849 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 CXorf51AA0A1B0GTR3 108 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 LOC730098B7Z3J9 87 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 ZNF821O75541 412 aaPredicted RBP18.95■□□□□ 0.62
SMPD1-203ENST00000527275 KRT37O76014 449 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 KAT7O95251 611 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 ASMTLO95671 621 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 ATP5BP06576 529 aaKnown RBP18.95■□□□□ 0.62
SMPD1-203ENST00000527275 SCNN1BP51168 640 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 RHOAP61586 193 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 TM6SF2Q9BZW4 377 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 HEBP1Q9NRV9 189 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 SAMD15Q9P1V8 674 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 ERVW-1Q9UQF0 538 aa18.95■□□□□ 0.62
SMPD1-203ENST00000527275 AAR2Q9Y312 384 aaKnown RBP18.95■□□□□ 0.62
SMPD1-203ENST00000527275 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.94■□□□□ 0.62
SMPD1-203ENST00000527275 TCP11X1B4DZS4 312 aa18.94■□□□□ 0.62
SMPD1-203ENST00000527275 GOLGA8RI6L899 631 aa18.94■□□□□ 0.62
SMPD1-203ENST00000527275 UGT1A9O60656 530 aa18.94■□□□□ 0.62
SMPD1-203ENST00000527275 POLBP06746 335 aa18.94■□□□□ 0.62
SMPD1-203ENST00000527275 MMP2P08253 660 aa18.94■□□□□ 0.62
SMPD1-203ENST00000527275 SNRPAP09012 282 aaKnown RBP18.94■□□□□ 0.62
SMPD1-203ENST00000527275 DLDP09622 509 aaKnown RBP18.94■□□□□ 0.62
SMPD1-203ENST00000527275 CR2P20023 1033 aa18.94■□□□□ 0.62
SMPD1-203ENST00000527275 PTPRNQ16849 979 aa18.94■□□□□ 0.62
SMPD1-203ENST00000527275 ACCSLQ4AC99 568 aa18.94■□□□□ 0.62
SMPD1-203ENST00000527275 DGKKQ5KSL6 1271 aa18.94■□□□□ 0.62
SMPD1-203ENST00000527275 ALG1LQ6GMV1 187 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms