RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 DAB2P98082 770 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 FANCCQ00597 558 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 CYP4F3Q08477 520 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 PDE1CQ14123 709 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-207ENST00000527189 PIGHQ14442 188 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-207ENST00000527189 AGERQ15109 404 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 CA9Q16790 459 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 UGP2Q16851 508 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 HES3Q5TGS1 186 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 TMCO4Q5TGY1 634 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 PEBP4Q96S96 227 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 KCTD15Q96SI1 283 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-207ENST00000527189 ZWILCHQ9H900 591 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 CBX8Q9HC52 389 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 GPATCH2LQ9NWQ4 482 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 GGT7Q9UJ14 662 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 ITM2BQ9Y287 266 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 GPSM3Q9Y4H4 160 aa13.54□□□□□ -0.24
CAPN1-207ENST00000527189 SYCE3A1L190 88 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 TMEM110-MUSTN1A8MSY1 372 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 K7ESM1 405 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 TPP1O14773 563 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 MMP20O60882 483 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 PALMO75781 387 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 SERPING1P05155 500 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 PEX5P50542 639 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 RENBPP51606 427 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 THOP1P52888 689 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 POLR2LP62875 67 aaKnown RBP13.53□□□□□ -0.24
CAPN1-207ENST00000527189 ZBED6P86452 979 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 IL10RBQ08334 325 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 TARDBPQ13148 414 aaKnown RBP eCLIP13.53□□□□□ -0.24
CAPN1-207ENST00000527189 RTP5Q14D33 572 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 DPYSL2Q16555 572 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 PPP6R3Q5H9R7 873 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-207ENST00000527189 HGSNATQ68CP4 663 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 ZCCHC8Q6NZY4 707 aaKnown RBP13.53□□□□□ -0.24
CAPN1-207ENST00000527189 ERAP2Q6P179 960 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 CYP4V2Q6ZWL3 525 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-207ENST00000527189 MARCH9Q86YJ5 346 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 ARHGAP12Q8IWW6 846 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 NXPE2Q96DL1 559 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 CELF6Q96J87 481 aaKnown RBP13.53□□□□□ -0.24
CAPN1-207ENST00000527189 ZNF599Q96NL3 588 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 TRIM7Q9C029 511 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 ATP13A3Q9H7F0 1226 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 SCUBE2Q9NQ36 999 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 CWC15Q9P013 229 aaKnown RBP13.53□□□□□ -0.24
CAPN1-207ENST00000527189 SALL4Q9UJQ4 1053 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 CAPN11Q9UMQ6 739 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 CLCA2Q9UQC9 943 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 ACACAQ13085 2346 aa13.53□□□□□ -0.24
CAPN1-207ENST00000527189 GOLGA6L19H0YKK7 550 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 INSIG1O15503 277 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 FFAR2O15552 330 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 AQP9O43315 295 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 JUNDP17535 347 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 SERPINA4P29622 427 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 INSM1Q01101 510 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-207ENST00000527189 EIF2B5Q13144 721 aaKnown RBP13.52□□□□□ -0.25
CAPN1-207ENST00000527189 DPYSQ14117 519 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 LRRC14Q15048 493 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 TDRD12Q587J7 1177 aaKnown RBP13.52□□□□□ -0.25
CAPN1-207ENST00000527189 ZNF542PQ5EBM4 170 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 CFAP58Q5T655 872 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 SRLQ86TD4 932 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 LUZP1Q86V48 1076 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 NIPA2Q8N8Q9 360 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 DCBLD1Q8N8Z6 715 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 TP53I13Q8NBR0 393 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-207ENST00000527189 NETO2Q8NC67 525 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 TSEN2Q8NCE0 465 aaKnown RBP13.52□□□□□ -0.25
CAPN1-207ENST00000527189 ZNF548Q8NEK5 533 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-207ENST00000527189 EXOC2Q96KP1 924 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 APOLD1Q96LR9 279 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 BBC3Q96PG8 261 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-207ENST00000527189 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.52□□□□□ -0.25
CAPN1-207ENST00000527189 SP110Q9HB58 689 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 MYO1AQ9UBC5 1043 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 SPASTQ9UBP0 616 aa13.52□□□□□ -0.25
CAPN1-207ENST00000527189 APC2O95996 2303 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 A0A1W2PQ67 120 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 H3BRJ5 948 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 DFFAO00273 331 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 BUB1BO60566 1050 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-207ENST00000527189 PIGNO95427 931 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 IGFALSP35858 605 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 EIF4A3P38919 411 aaKnown RBP13.51□□□□□ -0.25
CAPN1-207ENST00000527189 ARL4AP40617 200 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 BLKP51451 505 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 BCL2L1Q07817 233 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 MACC1Q6ZN28 852 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 POLNQ7Z5Q5 900 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 CAMK1DQ8IU85 385 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 SDR16C5Q8N3Y7 309 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 TEKT4Q8WW24 435 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 SPOCK2Q92563 424 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 ECHDC3Q96DC8 303 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 PSKH2Q96QS6 385 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 IL12RB2Q99665 862 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms