RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 PPP2CBP62714 309 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 PPP2CAP67775 309 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 NHLH1Q02575 133 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 RPL6Q02878 288 aaKnown RBP16.78■□□□□ 0.28
SMCO4-204ENST00000527149 ITKQ08881 620 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 SNX1Q13596 522 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 SIM2Q14190 667 aaPredicted RBP16.78■□□□□ 0.28
SMCO4-204ENST00000527149 CYP1B1Q16678 543 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 LRRC73Q5JTD7 316 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 KDELC1Q6UW63 502 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 SYT10Q6XYQ8 523 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMCO4-204ENST00000527149 C12orf50Q8NA57 414 aaPredicted RBP16.78■□□□□ 0.28
SMCO4-204ENST00000527149 OR2T34Q8NGX1 318 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 OR14C36Q8NHC7 312 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 SPATA22Q8NHS9 363 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 CCDC110Q8TBZ0 833 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 OXNAD1Q96HP4 312 aaPredicted RBP16.78■□□□□ 0.28
SMCO4-204ENST00000527149 C16orf45Q96MC5 204 aaPredicted RBP16.78■□□□□ 0.28
SMCO4-204ENST00000527149 TRIB3Q96RU7 358 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 RBM15Q96T37 977 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMCO4-204ENST00000527149 ORAI3Q9BRQ5 295 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 PCED1AQ9H1Q7 454 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 KDM4CQ9H3R0 1056 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 DYRK4Q9NR20 520 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 HAUS2Q9NVX0 235 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 GGT7Q9UJ14 662 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 SMG5Q9UPR3 1016 aaKnown RBP16.78■□□□□ 0.28
SMCO4-204ENST00000527149 ITM2BQ9Y287 266 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 FADS3Q9Y5Q0 445 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 SAR1BQ9Y6B6 198 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 PI4KAP42356 2102 aa16.78■□□□□ 0.28
SMCO4-204ENST00000527149 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 PROB1E7EW31 1015 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 PDE2AO00408 941 aaPredicted RBP16.77■□□□□ 0.28
SMCO4-204ENST00000527149 GCATO75600 419 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 IGHV4-34P06331 123 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 PDHA1P08559 390 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 SERPINF2P08697 491 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 ITIH2P19823 946 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 PTGER3P43115 390 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 UGP2Q16851 508 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 SPDYCQ5MJ68 293 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 ANKRD20A2Q5SQ80 823 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 ANKRD20A1Q5TYW2 823 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 ANKRD20A3Q5VUR7 823 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 TTC27Q6P3X3 843 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 CEP68Q76N32 757 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 TMEFF1Q8IYR6 380 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 CADM4Q8NFZ8 388 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 PIH1D2Q8WWB5 315 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 RAB7BQ96AH8 199 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 FCRL5Q96RD9 977 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 PHOX2BQ99453 314 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 AP1M1Q9BXS5 423 aa16.77■□□□□ 0.28
SMCO4-204ENST00000527149 PLXNA2O75051 1894 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 LATO43561 262 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 MT-CYBP00156 380 aaPredicted RBP16.76■□□□□ 0.27
SMCO4-204ENST00000527149 CPP00450 1065 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 PSMB4P28070 264 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 MMP12P39900 470 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 SUOXP51687 545 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 RALGDSQ12967 914 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 TMEM259Q4ZIN3 620 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 FBXL19Q6PCT2 694 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 PID1Q7Z2X4 250 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 GLIS1Q8NBF1 620 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 HSPA12BQ96MM6 686 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 MCCC1Q96RQ3 725 aaPredicted RBP16.76■□□□□ 0.27
SMCO4-204ENST00000527149 NAP1L3Q99457 506 aaPredicted RBP16.76■□□□□ 0.27
SMCO4-204ENST00000527149 MLPHQ9BV36 600 aaPredicted RBP16.76■□□□□ 0.27
SMCO4-204ENST00000527149 PREBQ9HCU5 417 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 PCDH12Q9NPG4 1184 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 RSPH14Q9UHP6 348 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 DRG1Q9Y295 367 aaKnown RBP16.76■□□□□ 0.27
SMCO4-204ENST00000527149 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.76■□□□□ 0.27
SMCO4-204ENST00000527149 PCDHB9Q9Y5E1 797 aa16.76■□□□□ 0.27
SMCO4-204ENST00000527149 LRRC72A6NJI9 287 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 F5H423 210 aaPredicted RBP16.75■□□□□ 0.27
SMCO4-204ENST00000527149 RIOK3O14730 519 aaKnown RBP16.75■□□□□ 0.27
SMCO4-204ENST00000527149 NDUFS2O75306 463 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 STK10O94804 968 aaKnown RBP16.75■□□□□ 0.27
SMCO4-204ENST00000527149 PRKCGP05129 697 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 KCNJ1P48048 391 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 CCDC15Q0P6D6 951 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 ELF2Q15723 593 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 LPAL2Q16609 132 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 ARMC12Q5T9G4 340 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 KIAA0895LQ68EN5 471 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 ITPRIPL1Q6GPH6 555 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 PRR23BQ6ZRT6 265 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 LPCAT2Q7L5N7 544 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 TRIM69Q86WT6 500 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 DEFB119Q8N690 84 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 CAPZA3Q96KX2 299 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 SMIM14Q96QK8 99 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 FERMT1Q9BQL6 677 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 SEMA4AQ9H3S1 761 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 VPS45Q9NRW7 570 aa16.75■□□□□ 0.27
SMCO4-204ENST00000527149 HOMER3Q9NSC5 361 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms