RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 IZUMO2Q6UXV1 221 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 ACAD11Q709F0 780 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 ARRDC2Q8TBH0 407 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 PABPC5Q96DU9 382 aaKnown RBP17.72■□□□□ 0.43
USH1C-205ENST00000527020 POMKQ9H5K3 350 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 VPS45Q9NRW7 570 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 CDYLQ9Y232 598 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 PCDHB5Q9Y5E4 795 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 PPARGP37231 505 aaPredicted RBP17.71■□□□□ 0.43
USH1C-205ENST00000527020 ACLYP53396 1101 aa17.71■□□□□ 0.43
USH1C-205ENST00000527020 TNK2Q07912 1038 aa17.71■□□□□ 0.43
USH1C-205ENST00000527020 ITKQ08881 620 aa17.71■□□□□ 0.43
USH1C-205ENST00000527020 CDC16Q13042 620 aa17.71■□□□□ 0.43
USH1C-205ENST00000527020 PDCD2Q16342 344 aaPredicted RBP17.71■□□□□ 0.43
USH1C-205ENST00000527020 RAP1GAP2Q684P5 730 aa17.71■□□□□ 0.43
USH1C-205ENST00000527020 TRIM67Q6ZTA4 783 aa17.71■□□□□ 0.43
USH1C-205ENST00000527020 DHDDSQ86SQ9 333 aa17.71■□□□□ 0.43
USH1C-205ENST00000527020 ARHGAP18Q8N392 663 aa17.71■□□□□ 0.43
USH1C-205ENST00000527020 SLC26A7Q8TE54 656 aa17.71■□□□□ 0.43
USH1C-205ENST00000527020 MYEOVQ96EZ4 313 aa17.71■□□□□ 0.43
USH1C-205ENST00000527020 CATSPER2Q96P56 530 aa17.71■□□□□ 0.43
USH1C-205ENST00000527020 ECSITQ9BQ95 431 aa17.71■□□□□ 0.43
USH1C-205ENST00000527020 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.71■□□□□ 0.43
USH1C-205ENST00000527020 CCL22O00626 93 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 AIM2O14862 343 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 PAPSS2O95340 614 aaPredicted RBP17.7■□□□□ 0.42
USH1C-205ENST00000527020 ATP5F1P24539 256 aaPredicted RBP17.7■□□□□ 0.42
USH1C-205ENST00000527020 ARSDP51689 593 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 CLCN5P51795 746 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 SLC12A2P55011 1212 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 PFKPQ01813 784 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 TRIP4Q15650 581 aaPredicted RBP17.7■□□□□ 0.42
USH1C-205ENST00000527020 SLC14A2Q15849 920 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 SIRPB2Q5JXA9 342 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 TMEM154Q6P9G4 183 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 CIR1Q86X95 450 aaPredicted RBP17.7■□□□□ 0.42
USH1C-205ENST00000527020 RP9Q8TA86 221 aaKnown RBP17.7■□□□□ 0.42
USH1C-205ENST00000527020 JADE3Q92613 823 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 MAELQ96JY0 434 aaKnown RBP17.7■□□□□ 0.42
USH1C-205ENST00000527020 BTN2A3PQ96KV6 586 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 MARK4Q96L34 752 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 B3GALT6Q96L58 329 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 SP110Q9HB58 689 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 ADAMTS6Q9UKP5 1117 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 SDHDO14521 159 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 SLC22A2O15244 555 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 GJB3O75712 270 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 WISP3O95389 354 aaPredicted RBP17.7■□□□□ 0.42
USH1C-205ENST00000527020 ATXN1LP0C7T5 689 aaKnown RBP17.7■□□□□ 0.42
USH1C-205ENST00000527020 NUDT2P50583 147 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 ASPHQ12797 758 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 MRPL58Q14197 206 aaKnown RBP17.7■□□□□ 0.42
USH1C-205ENST00000527020 LBRQ14739 615 aaKnown RBP17.7■□□□□ 0.42
USH1C-205ENST00000527020 RASIP1Q5U651 963 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 PIWIL4Q7Z3Z4 852 aaKnown RBP17.7■□□□□ 0.42
USH1C-205ENST00000527020 MIB1Q86YT6 1006 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 CILP2Q8IUL8 1156 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 ATP6V0D2Q8N8Y2 350 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 CALML6Q8TD86 181 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 ANKRD49Q8WVL7 239 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 GATA6Q92908 595 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 SPDL1Q96EA4 605 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 CRISPLD1Q9H336 500 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 TNFRSF12AQ9NP84 129 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 NCKIPSDQ9NZQ3 722 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 PACSIN3Q9UKS6 424 aa17.7■□□□□ 0.42
USH1C-205ENST00000527020 DRGXA6NNA5 263 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 H3BNX3 289 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 IGLV3-27P01718 113 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 HNRNPLP14866 589 aaKnown RBP eCLIP17.69■□□□□ 0.42
USH1C-205ENST00000527020 YWHAQP27348 245 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 DSG1Q02413 1049 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 CTXN3Q4LDR2 81 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 SH2D4BQ5SQS7 431 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 PTAR1Q7Z6K3 402 aaPredicted RBP17.69■□□□□ 0.42
USH1C-205ENST00000527020 LDB1Q86U70 411 aaPredicted RBP17.69■□□□□ 0.42
USH1C-205ENST00000527020 DSELQ8IZU8 1212 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 SH3RF2Q8TEC5 729 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 FBXO32Q969P5 355 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 UBXN10Q96LJ8 280 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 SUDS3Q9H7L9 328 aaPredicted RBP17.69■□□□□ 0.42
USH1C-205ENST00000527020 ZBTB26Q9HCK0 441 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 UXTQ9UBK9 157 aaPredicted RBP17.69■□□□□ 0.42
USH1C-205ENST00000527020 MTF2Q9Y483 593 aaPredicted RBP17.69■□□□□ 0.42
USH1C-205ENST00000527020 KCTD3Q9Y597 815 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 LOC285095A0A1B0GVY8 99 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 A8MT66 165 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 SYN3O14994 580 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 SLC7A4O43246 635 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 LDB2O43679 373 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 TADA2AO75478 443 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 VNN2O95498 520 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 ADSLP30566 484 aaPredicted RBP17.69■□□□□ 0.42
USH1C-205ENST00000527020 KPNA2P52292 529 aaKnown RBP17.69■□□□□ 0.42
USH1C-205ENST00000527020 SULT2A1Q06520 285 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 TAF10Q12962 218 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 CYLC2Q14093 348 aaPredicted RBP17.69■□□□□ 0.42
USH1C-205ENST00000527020 MAP3K21Q5TCX8 1036 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 HECTD2Q5U5R9 776 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 TMEM207Q6UWW9 146 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms