RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 TDRD6O60522 2096 aaKnown RBP13.84□□□□□ -0.19
CD44-224ENST00000526669 C16orf96A6NNT2 1141 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 E7EVH7 732 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 TRAFD1O14545 582 aaPredicted RBP13.83□□□□□ -0.2
CD44-224ENST00000526669 USP12O75317 370 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 RNASEH2AO75792 299 aaKnown RBP13.83□□□□□ -0.2
CD44-224ENST00000526669 ANXA9O76027 345 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 CTPS1P17812 591 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 ITIH2P19823 946 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 CES1P23141 567 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 ITGB7P26010 798 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 DRD3P35462 400 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 SLC7A5Q01650 507 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 CSTF1Q05048 431 aaKnown RBP13.83□□□□□ -0.2
CD44-224ENST00000526669 MPP3Q13368 585 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 GRM3Q14832 879 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 PTPRRQ15256 657 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 TTC31Q49AM3 519 aaPredicted RBP13.83□□□□□ -0.2
CD44-224ENST00000526669 ZNF805Q5CZA5 627 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 ARMC12Q5T9G4 340 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 C8orf74Q6P047 294 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.83□□□□□ -0.2
CD44-224ENST00000526669 C1orf210Q8IVY1 113 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 SLC25A41Q8N5S1 370 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 PDCD7Q8N8D1 485 aaKnown RBP13.83□□□□□ -0.2
CD44-224ENST00000526669 RLN3Q8WXF3 142 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 SLCO2A1Q92959 643 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 TADA1Q96BN2 335 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 IFT43Q96FT9 208 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 PPP1R16AQ96I34 528 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 OMDQ99983 421 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 LRRC1Q9BTT6 524 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 DPH5Q9H2P9 285 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 PRMT8Q9NR22 394 aaPredicted RBP13.83□□□□□ -0.2
CD44-224ENST00000526669 PIH1D1Q9NWS0 290 aaKnown RBP13.83□□□□□ -0.2
CD44-224ENST00000526669 FBXL12Q9NXK8 326 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 EBF1Q9UH73 591 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 FEZ2Q9UHY8 353 aaPredicted RBP13.83□□□□□ -0.2
CD44-224ENST00000526669 CYP8B1Q9UNU6 501 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 INVSQ9Y283 1065 aa13.83□□□□□ -0.2
CD44-224ENST00000526669 TCRBV7S3A2A0A539 114 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 HTRA2O43464 458 aaPredicted RBP13.82□□□□□ -0.2
CD44-224ENST00000526669 SOCS5O75159 536 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 PGLSO95336 258 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 AGTP01019 485 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 PRLP01236 227 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 TIMP2P16035 220 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 C5AR1P21730 350 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 XPAP23025 273 aaPredicted RBP13.82□□□□□ -0.2
CD44-224ENST00000526669 ADCY8P40145 1251 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 P2RY2P41231 377 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 ABL2P42684 1182 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 CHRNA4P43681 627 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 FNTBP49356 437 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 EPHB1P54762 984 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 CDK18Q07002 472 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 SEMA5AQ13591 1074 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 ANKRD22Q5VYY1 191 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 MAML2Q8IZL2 1156 aaPredicted RBP13.82□□□□□ -0.2
CD44-224ENST00000526669 MMGT1Q8N4V1 131 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 LRIG1Q96JA1 1093 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 ZNF641Q96N77 438 aaPredicted RBP13.82□□□□□ -0.2
CD44-224ENST00000526669 TBL1YQ9BQ87 522 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 FSD1LQ9BXM9 530 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 GGT7Q9UJ14 662 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 ITM2BQ9Y287 266 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 AAR2Q9Y312 384 aaKnown RBP13.82□□□□□ -0.2
CD44-224ENST00000526669 PIKFYVEQ9Y2I7 2098 aa13.82□□□□□ -0.2
CD44-224ENST00000526669 A0A0U1RQS6 177 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 GOLGA6CA6NDK9 693 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 GOLGA6BA6NDN3 693 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 PRR23AA6NEV1 266 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 FAM187AA6NFU0 413 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 EFCAB8A8MWE9 144 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 A8MX80 341 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 PRR33A8MZF0 331 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 UPK3BL1B0FP48 263 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 UPK3BL2E5RIL1 263 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 DNALI1O14645 258 aaPredicted RBP13.81□□□□□ -0.2
CD44-224ENST00000526669 AXIN1O15169 862 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 GPR37L1O60883 481 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 PAPSS2O95340 614 aaPredicted RBP13.81□□□□□ -0.2
CD44-224ENST00000526669 AP2A1O95782 977 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 APRTP07741 180 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 ALPIP09923 528 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 PIRTP0C851 137 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 GOLGA6DP0CG33 693 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 CA4P22748 312 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 TPMTP51580 245 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 NEK3P51956 506 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 SLC14A2Q15849 920 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 TEX35Q5T0J7 233 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 PIP5KL1Q5T9C9 394 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 AGBL4Q5VU57 503 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 IZUMO3Q5VZ72 239 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 KCTD11Q693B1 232 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 FBXL19Q6PCT2 694 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 C4orf22Q6V702 233 aa13.81□□□□□ -0.2
CD44-224ENST00000526669 SYDE1Q6ZW31 735 aaPredicted RBP13.81□□□□□ -0.2
CD44-224ENST00000526669 ERN2Q76MJ5 926 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms