RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SIX1Q15475 284 aaPredicted RBP13.04□□□□□ -0.32
SMPD1-202ENST00000526280 UGP2Q16851 508 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 CFAP58Q5T655 872 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 LYSMD4Q5XG99 296 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 NEK5Q6P3R8 708 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 ARMCX6Q7L4S7 300 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 PID1Q7Z2X4 250 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 ZNF567Q8N184 647 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 RASGEF1CQ8N431 466 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 MAIP1Q8WWC4 291 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 ATG4AQ8WYN0 398 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 DNASE2BQ8WZ79 361 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 BIRC7Q96CA5 298 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 IMP4Q96G21 291 aaKnown RBP13.04□□□□□ -0.32
SMPD1-202ENST00000526280 C16orf45Q96MC5 204 aaPredicted RBP13.04□□□□□ -0.32
SMPD1-202ENST00000526280 HSPA12BQ96MM6 686 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 OSBPL9Q96SU4 736 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 FERMT1Q9BQL6 677 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 GLOD4Q9HC38 313 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 TRHDEQ9UKU6 1024 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 DNPEPQ9ULA0 475 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 TPX2Q9ULW0 747 aaKnown RBP13.04□□□□□ -0.32
SMPD1-202ENST00000526280 SNX12Q9UMY4 172 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.04□□□□□ -0.32
SMPD1-202ENST00000526280 RAI2Q9Y5P3 530 aa13.04□□□□□ -0.32
SMPD1-202ENST00000526280 PRR23AA6NEV1 266 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 UPK3BL1B0FP48 263 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 UPK3BL2E5RIL1 263 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 CES2O00748 559 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 DYNC1I1O14576 645 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 KCNN4O15554 427 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 SPINT1O43278 529 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 TSPAN6O43657 245 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 LIASO43766 372 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 FZD6O60353 706 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 FSBPO95073 299 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 PGLSO95336 258 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 RETP07949 1114 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 ITPKAP23677 461 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 CD86P42081 329 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 POLR2LP62875 67 aaKnown RBP13.03□□□□□ -0.32
SMPD1-202ENST00000526280 SKOR1P84550 965 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 CCNG2Q16589 344 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 LONRF2Q1L5Z9 754 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 WDR45BQ5MNZ6 344 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 ARMC12Q5T9G4 340 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 PAPD7Q5XG87 772 aaKnown RBP13.03□□□□□ -0.32
SMPD1-202ENST00000526280 NYAP1Q6ZVC0 841 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 ASCL5Q7RTU5 278 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 PRPF39Q86UA1 669 aaKnown RBP13.03□□□□□ -0.32
SMPD1-202ENST00000526280 TRIM69Q86WT6 500 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 COG1Q8WTW3 980 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 C1orf54Q8WWF1 131 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 TADA1Q96BN2 335 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 PCDH12Q9NPG4 1184 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 KLHL8Q9P2G9 620 aaPredicted RBP13.03□□□□□ -0.32
SMPD1-202ENST00000526280 TTC7AQ9ULT0 858 aaPredicted RBP13.03□□□□□ -0.32
SMPD1-202ENST00000526280 PCDHB9Q9Y5E1 797 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 PCDHGA5Q9Y5G8 931 aa13.03□□□□□ -0.32
SMPD1-202ENST00000526280 WDR87Q6ZQQ6 2873 aa13.02□□□□□ -0.32
SMPD1-202ENST00000526280 FRYLO94915 3013 aa13.02□□□□□ -0.32
SMPD1-202ENST00000526280 RIF1Q5UIP0 2472 aaKnown RBP13.02□□□□□ -0.32
SMPD1-202ENST00000526280 TNRC6BQ9UPQ9 1833 aaKnown RBP13.02□□□□□ -0.32
SMPD1-202ENST00000526280 C5orf60A6NFR6 353 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 MEI4A8MW99 385 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 KIF2AO00139 706 aaPredicted RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 RIOK3O14730 519 aaKnown RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 LATO43561 262 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 RNGTTO60942 597 aaKnown RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 STK10O94804 968 aaKnown RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PCDH8O95206 1070 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PRLP01236 227 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PDHA1P08559 390 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PRLRP16471 622 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 ITIH2P19823 946 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 XPAP23025 273 aaPredicted RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 MAOBP27338 520 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PPP2CBP62714 309 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PPP2CAP67775 309 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 CREB5Q02930 508 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 ELP6Q0PNE2 266 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 OASLQ15646 514 aaKnown RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 SLC14A2Q15849 920 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 LRRC73Q5JTD7 316 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 ANKRD20A2Q5SQ80 823 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 ANKRD20A1Q5TYW2 823 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 ANKRD20A3Q5VUR7 823 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PEAR1Q5VY43 1037 aaPredicted RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 DRICH1Q6PGQ1 229 aaPredicted RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 CYP2U1Q7Z449 544 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 HORMAD1Q86X24 394 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 SYT12Q8IV01 421 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PAF1Q8N7H5 531 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 FAM71DQ8N9W8 422 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PDCD6IPQ8WUM4 868 aaKnown RBP13.02□□□□□ -0.33
SMPD1-202ENST00000526280 PIH1D2Q8WWB5 315 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 MS4A14Q96JA4 679 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 FEM1CQ96JP0 617 aa13.02□□□□□ -0.33
SMPD1-202ENST00000526280 FCRL5Q96RD9 977 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms