RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 LZTFL1Q9NQ48 299 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 ZFR2Q9UPR6 939 aaKnown RBP17.42■□□□□ 0.38
LMX1B-203ENST00000526117 SHROOM3Q8TF72 1996 aa17.42■□□□□ 0.38
LMX1B-203ENST00000526117 HLA-DQB2P05538 268 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 PTMAP06454 111 aaKnown RBP17.41■□□□□ 0.38
LMX1B-203ENST00000526117 SDHBP21912 280 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 MAOBP27338 520 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 AP1B1Q10567 949 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 OVGP1Q12889 678 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 KLF1Q13351 362 aaPredicted RBP17.41■□□□□ 0.38
LMX1B-203ENST00000526117 AGERQ15109 404 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 SF3A2Q15428 464 aaKnown RBP17.41■□□□□ 0.38
LMX1B-203ENST00000526117 TMEM52BQ4KMG9 183 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 CFAP58Q5T655 872 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 NAPEPLDQ6IQ20 393 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 TTC7BQ86TV6 843 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 IQCHQ86VS3 1027 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 ZCCHC9Q8N567 271 aaKnown RBP17.41■□□□□ 0.38
LMX1B-203ENST00000526117 CNTD1Q8N815 330 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 ARRDC2Q8TBH0 407 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 SNX19Q92543 992 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 LENG8Q96PV6 779 aaPredicted RBP17.41■□□□□ 0.38
LMX1B-203ENST00000526117 SEMA3CQ99985 751 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 HERPUD2Q9BSE4 406 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 C1QTNF2Q9BXJ5 285 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 CARD9Q9H257 536 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 PACSIN2Q9UNF0 486 aaPredicted RBP17.41■□□□□ 0.38
LMX1B-203ENST00000526117 PPIL1Q9Y3C6 166 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 RALGAPA1Q6GYQ0 2036 aa17.41■□□□□ 0.38
LMX1B-203ENST00000526117 A0A1W2PQU0 124 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 PATE3B3GLJ2 98 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 PRAMEF26H0Y7S4 382 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 KCNK1O00180 336 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 RIOK3O14730 519 aaKnown RBP17.4■□□□□ 0.38
LMX1B-203ENST00000526117 ZSCAN12O43309 604 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 FZD6O60353 706 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 GJB3O75712 270 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 NEBLO76041 1014 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 JCHAINP01591 159 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 SYPP08247 313 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 NFKBIAP25963 317 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 MMP12P39900 470 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 MAXP61244 160 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 RPL26P61254 145 aaKnown RBP17.4■□□□□ 0.38
LMX1B-203ENST00000526117 IRX4P78413 519 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 ZBTB17Q13105 803 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 TEAD4Q15561 434 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 CCDC6Q16204 474 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 TEX44Q53QW1 395 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 SLC45A4Q5BKX6 768 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 ZSWIM9Q86XI8 627 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 KIAA2013Q8IYS2 634 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 TTC13Q8NBP0 860 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 TMEM145Q8NBT3 493 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 DENND6BQ8NEG7 585 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 TADA1Q96BN2 335 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 HEMGNQ9BXL5 484 aa17.4■□□□□ 0.38
LMX1B-203ENST00000526117 SAE1Q9UBE0 346 aaPredicted RBP17.4■□□□□ 0.38
LMX1B-203ENST00000526117 RPL26L1Q9UNX3 145 aaKnown RBP17.4■□□□□ 0.38
LMX1B-203ENST00000526117 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.4■□□□□ 0.38
LMX1B-203ENST00000526117 PLXNA2O75051 1894 aa17.39■□□□□ 0.38
LMX1B-203ENST00000526117 ANKRD36A6QL64 1941 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 ARHGAP33O14559 1287 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 VILLO15195 856 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 PCDH8O95206 1070 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 PGLSO95336 258 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 CA4P22748 312 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 PTPN3P26045 913 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 CCDC173Q0VFZ6 552 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 TRAF2Q12933 501 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 RPS6KA1Q15418 735 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 AASDHQ4L235 1098 aaPredicted RBP17.39■□□□□ 0.37
LMX1B-203ENST00000526117 TCEAL6Q6IPX3 200 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 ERAP2Q6P179 960 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 IL27RAQ6UWB1 636 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 REXO1L1PQ8IX06 675 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 ACTL9Q8TC94 416 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 NETO1Q8TDF5 533 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 TCEAL3Q969E4 200 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 SKA1Q96BD8 255 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 TEKT5Q96M29 485 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 MIR1-1HGQ9H1L0 117 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 SLC25A51Q9H1U9 297 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 SMOC1Q9H4F8 434 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 PCDH12Q9NPG4 1184 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 PHTF1Q9UMS5 762 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 SLCO1B1Q9Y6L6 691 aa17.39■□□□□ 0.37
LMX1B-203ENST00000526117 CACNA1EQ15878 2313 aa17.38■□□□□ 0.37
LMX1B-203ENST00000526117 A0A1W2PR77 199 aa17.38■□□□□ 0.37
LMX1B-203ENST00000526117 GOLGA6L9A6NEM1 432 aa17.38■□□□□ 0.37
LMX1B-203ENST00000526117 CFIP05156 583 aa17.38■□□□□ 0.37
LMX1B-203ENST00000526117 MMP2P08253 660 aa17.38■□□□□ 0.37
LMX1B-203ENST00000526117 ENGP17813 658 aa17.38■□□□□ 0.37
LMX1B-203ENST00000526117 HNRNPA2B1P22626 353 aaKnown RBP17.38■□□□□ 0.37
LMX1B-203ENST00000526117 XPAP23025 273 aaPredicted RBP17.38■□□□□ 0.37
LMX1B-203ENST00000526117 CD38P28907 300 aa17.38■□□□□ 0.37
LMX1B-203ENST00000526117 OTUD4Q01804 1114 aaKnown RBP17.38■□□□□ 0.37
LMX1B-203ENST00000526117 NIPAL4Q0D2K0 466 aa17.38■□□□□ 0.37
LMX1B-203ENST00000526117 WASHC5Q12768 1159 aa17.38■□□□□ 0.37
LMX1B-203ENST00000526117 SEL1L3Q68CR1 1132 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms