RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ANKRD20A1Q5TYW2 823 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 ANKRD20A3Q5VUR7 823 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 LPCAT2Q7L5N7 544 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 FAM124AQ86V42 546 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 FRMD1Q8N878 549 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 FOXJ1Q92949 421 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 LOXL4Q96JB6 756 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 TMEM121Q9BTD3 319 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 TDRD1Q9BXT4 1180 aaKnown RBP20.93■□□□□ 0.94
CD44-222ENST00000526025 C10orf88Q9H8K7 445 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 GOLGA6L10A0A0M3HER8 536 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 TTC24A2A3L6 582 aaPredicted RBP20.92■□□□□ 0.94
CD44-222ENST00000526025 AREL1O15033 823 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 ZNF185O15231 689 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 TSPAN6O43657 245 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 TIMP2P16035 220 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 NFKB1P19838 968 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 CD86P42081 329 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 CCR5P51681 352 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 ELP6Q0PNE2 266 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 IHHQ14623 411 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 UGP2Q16851 508 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 ARMC12Q5T9G4 340 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 SYT10Q6XYQ8 523 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 PRPF39Q86UA1 669 aaKnown RBP20.92■□□□□ 0.94
CD44-222ENST00000526025 TRIM69Q86WT6 500 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 FAM71DQ8N9W8 422 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 OR14C36Q8NHC7 312 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 GPR174Q9BXC1 333 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 PHTF1Q9UMS5 762 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 ZNF148Q9UQR1 794 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 INVSQ9Y283 1065 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 PPIL1Q9Y3C6 166 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 PCDHGC4Q9Y5F7 938 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 FADS3Q9Y5Q0 445 aa20.92■□□□□ 0.94
CD44-222ENST00000526025 PLK4O00444 970 aa20.91■□□□□ 0.94
CD44-222ENST00000526025 NUDT1P36639 197 aa20.91■□□□□ 0.94
CD44-222ENST00000526025 DPP6P42658 865 aa20.91■□□□□ 0.94
CD44-222ENST00000526025 ABL2P42684 1182 aa20.91■□□□□ 0.94
CD44-222ENST00000526025 LRRK1Q38SD2 2015 aa20.91■□□□□ 0.94
CD44-222ENST00000526025 TTC7BQ86TV6 843 aa20.91■□□□□ 0.94
CD44-222ENST00000526025 CREG2Q8IUH2 290 aa20.91■□□□□ 0.94
CD44-222ENST00000526025 KLHDC8BQ8IXV7 354 aa20.91■□□□□ 0.94
CD44-222ENST00000526025 C16orf45Q96MC5 204 aaPredicted RBP20.91■□□□□ 0.94
CD44-222ENST00000526025 FAM153AQ9UHL3 310 aa20.91■□□□□ 0.94
CD44-222ENST00000526025 RSPH14Q9UHP6 348 aa20.91■□□□□ 0.94
CD44-222ENST00000526025 RAB23Q9ULC3 237 aa20.91■□□□□ 0.94
CD44-222ENST00000526025 GON4LQ3T8J9 2241 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 METTL12A8MUP2 240 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 ANXA9O76027 345 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 CPP00450 1065 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 XPAP23025 273 aaPredicted RBP20.9■□□□□ 0.94
CD44-222ENST00000526025 GDF10P55107 478 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 LMNB2Q03252 620 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 MPP3Q13368 585 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 KIAA0895LQ68EN5 471 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 KIAA1161Q6NSJ0 714 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 ERAP2Q6P179 960 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 C4orf22Q6V702 233 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 ZSWIM9Q86XI8 627 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 NDUFAF2Q8N183 169 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 SUMF1Q8NBK3 374 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 RBM15Q96T37 977 aaKnown RBP eCLIP20.9■□□□□ 0.94
CD44-222ENST00000526025 SMG5Q9UPR3 1016 aaKnown RBP20.9■□□□□ 0.94
CD44-222ENST00000526025 PCDHB9Q9Y5E1 797 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 SDK1Q7Z5N4 2213 aa20.9■□□□□ 0.94
CD44-222ENST00000526025 DOCK9Q9BZ29 2069 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 RIOK3O14730 519 aaKnown RBP20.89■□□□□ 0.93
CD44-222ENST00000526025 SPINT1O43278 529 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 LATO43561 262 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 EPOP01588 193 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 MMP12P39900 470 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 FNTAP49354 379 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 SNX1Q13596 522 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 PRPSAP1Q14558 356 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 PARP6Q2NL67 630 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 TMEM52BQ4KMG9 183 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 LAIR1Q6GTX8 287 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 KDELC1Q6UW63 502 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 PRR23BQ6ZRT6 265 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 ARHGEF18Q6ZSZ5 1173 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 ATL2Q8NHH9 583 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 CCDC110Q8TBZ0 833 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 PIH1D2Q8WWB5 315 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 FEM1CQ96JP0 617 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 MCCC1Q96RQ3 725 aaPredicted RBP20.89■□□□□ 0.93
CD44-222ENST00000526025 TRIB3Q96RU7 358 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 ADGRE3Q9BY15 652 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 C6orf106Q9H6K1 298 aaPredicted RBP20.89■□□□□ 0.93
CD44-222ENST00000526025 PCDH9Q9HC56 1237 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 PCDH12Q9NPG4 1184 aa20.89■□□□□ 0.93
CD44-222ENST00000526025 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.89■□□□□ 0.93
CD44-222ENST00000526025 AAR2Q9Y312 384 aaKnown RBP20.89■□□□□ 0.93
CD44-222ENST00000526025 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.88■□□□□ 0.93
CD44-222ENST00000526025 PHF2O75151 1096 aa20.88■□□□□ 0.93
CD44-222ENST00000526025 PRLP01236 227 aa20.88■□□□□ 0.93
CD44-222ENST00000526025 IGHV4-34P06331 123 aa20.88■□□□□ 0.93
CD44-222ENST00000526025 HOXD12P35452 270 aa20.88■□□□□ 0.93
CD44-222ENST00000526025 ACTN2P35609 894 aa20.88■□□□□ 0.93
CD44-222ENST00000526025 PAFAH1B1P43034 410 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms