RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 TBX20Q9UMR3 447 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 ICKQ9UPZ9 632 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 BRWD3Q6RI45 1802 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 CGNL1Q0VF96 1302 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 MAP3K19Q56UN5 1328 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 CRB1P82279 1406 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 A0A1W2PPC1 479 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 TARSL2A2RTX5 802 aaKnown RBP4.12□□□□□ -1.75
CD44-219ENST00000525685 CEP104O60308 925 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 CNOT3O75175 753 aaKnown RBP4.12□□□□□ -1.75
CD44-219ENST00000525685 CHRNB1P11230 501 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 YWHAQP27348 245 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 KRT9P35527 623 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 GJC1P36383 396 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 KCNJ4P48050 445 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 CCR5P51681 352 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 CLCNKBP51801 687 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 CDH15P55291 814 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 POU5F1BQ06416 359 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 RRS1Q15050 365 aaKnown RBP4.12□□□□□ -1.75
CD44-219ENST00000525685 INPP5JQ15735 1006 aaPredicted RBP4.12□□□□□ -1.75
CD44-219ENST00000525685 SLC18A3Q16572 532 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 PIK3CD-AS1Q5SR53 167 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 VWA5B1Q5TIE3 1220 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 NAA35Q5VZE5 725 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 IL20RBQ6UXL0 311 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 ZNF517Q6ZMY9 492 aaPredicted RBP4.12□□□□□ -1.75
CD44-219ENST00000525685 PIM3Q86V86 326 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 PALB2Q86YC2 1186 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 ARFGAP1Q8N6T3 406 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 TNIP2Q8NFZ5 429 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 RUFY2Q8WXA3 655 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 ZFYVE19Q96K21 471 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 NLRP4Q96MN2 994 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 EYA3Q99504 573 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 WDR83Q9BRX9 315 aaKnown RBP4.12□□□□□ -1.75
CD44-219ENST00000525685 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.12□□□□□ -1.75
CD44-219ENST00000525685 SLC26A6Q9BXS9 759 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 INTS2Q9H0H0 1204 aaKnown RBP4.12□□□□□ -1.75
CD44-219ENST00000525685 FZD3Q9NPG1 666 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 TMEM160Q9NX00 188 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 MSRB1Q9NZV6 116 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 PDP2Q9P2J9 529 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 HEY2Q9UBP5 337 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.12□□□□□ -1.75
CD44-219ENST00000525685 SLC4A4Q9Y6R1 1079 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 FLT4P35916 1363 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 KIF24Q5T7B8 1368 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 NPC1L1Q9UHC9 1359 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 SHANK3Q9BYB0 1731 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 DISP2A7MBM2 1401 aa4.12□□□□□ -1.75
CD44-219ENST00000525685 MAP2P11137 1827 aaKnown RBP4.11□□□□□ -1.75
CD44-219ENST00000525685 MYMKA6NI61 221 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 A6NLC8 198 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 TNPO2O14787 897 aaKnown RBP4.11□□□□□ -1.75
CD44-219ENST00000525685 PER2O15055 1255 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 INSIG1O15503 277 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 NDUFB8O95169 186 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 WNT1P04628 370 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 CHRM4P08173 479 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 HOXC9P31274 260 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 GGT5P36269 586 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 DPP6P42658 865 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 PTPN9P43378 593 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 MTNR1AP48039 350 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 LINC00205P59089 165 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 GALNT2Q10471 571 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 CAMK1Q14012 370 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 GJB7Q6PEY0 223 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 RRM2BQ7LG56 351 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 TMTC1Q8IUR5 882 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 HORMAD2Q8N7B1 307 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 NAXEQ8NCW5 288 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 MPLKIPQ8TAP9 179 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 WIPF2Q8TF74 440 aaPredicted RBP4.11□□□□□ -1.75
CD44-219ENST00000525685 LPAR1Q92633 364 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 ATOH1Q92858 354 aaPredicted RBP4.11□□□□□ -1.75
CD44-219ENST00000525685 SLC25A28Q96A46 364 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 APOPT1Q96IL0 206 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 ZNF333Q96JL9 665 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 FRG2BQ96QU4 278 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 PDCL3Q9H2J4 239 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 EPHX3Q9H6B9 360 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 PNRC2Q9NPJ4 139 aaKnown RBP4.11□□□□□ -1.75
CD44-219ENST00000525685 BABAM1Q9NWV8 329 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 PLEKHB1Q9UF11 243 aaPredicted RBP4.11□□□□□ -1.75
CD44-219ENST00000525685 OSGIN2Q9Y236 505 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 KNSTRNQ9Y448 316 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 RGPD1P0DJD0 1748 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 INSRP06213 1382 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 NCAPD2Q15021 1401 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 MEGF6O75095 1541 aa4.11□□□□□ -1.75
CD44-219ENST00000525685 TNS1Q9HBL0 1735 aaKnown RBP4.1□□□□□ -1.75
CD44-219ENST00000525685 TMEM272A0A1B0GTI8 110 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.1□□□□□ -1.75
CD44-219ENST00000525685 ARHGAP10A1A4S6 786 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 TYW5A2RUC4 315 aaKnown RBP4.1□□□□□ -1.75
CD44-219ENST00000525685 C17orf102A2RUQ5 167 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 DDTLA6NHG4 134 aaPredicted RBP4.1□□□□□ -1.75
CD44-219ENST00000525685 A6NNC1 897 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms