RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 NT5DC3Q86UY8 548 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 IQCHQ86VS3 1027 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 CAMK1DQ8IU85 385 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 TP53INP2Q8IXH6 220 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 OXR1Q8N573 874 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 TEX26Q8N6G2 289 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 FAM174AQ8TBP5 190 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 MAML1Q92585 1016 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 KRT35Q92764 455 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 TCEAL3Q969E4 200 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 FAM131CQ96AQ9 280 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 IFT43Q96FT9 208 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC6A18Q96N87 628 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 OLFM3Q96PB7 478 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 PPP1R2P1Q96PQ5 205 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 VAT1Q99536 393 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 LGMNQ99538 433 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 SEMA3CQ99985 751 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 HEMGNQ9BXL5 484 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 ADGRE3Q9BY15 652 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 SMOC1Q9H4F8 434 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 NOD2Q9HC29 1040 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 PARD6AQ9NPB6 346 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 PCDH12Q9NPG4 1184 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 GDF3Q9NR23 364 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 TMEM74BQ9NUR3 256 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 KLHL8Q9P2G9 620 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 PPP2R2CQ9Y2T4 447 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 PCDHB9Q9Y5E1 797 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 FADS3Q9Y5Q0 445 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 CAPN6Q9Y6Q1 641 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 CACNA1HO95180 2353 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 CKAP5Q14008 2032 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 A0A1B0GVT2 93 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 CFAP69A5D8W1 941 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 GOLGA6CA6NDK9 693 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 GOLGA6BA6NDN3 693 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 PATE3B3GLJ2 98 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 RNF103O00237 685 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 KCNK3O14649 394 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 FPGTO14772 594 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 MUSKO15146 869 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 VILLO15195 856 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 YKT6O15498 198 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 LZTS3O60299 673 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 TRIOO75962 3097 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 PEX11BO96011 259 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 JCHAINP01591 159 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 HLA-DQB2P05538 268 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 GOLGA6DP0CG33 693 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 PYGMP11217 842 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 TIMP2P16035 220 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 PECAM1P16284 738 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 PRLRP16471 622 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 MMP12P39900 470 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 RGRP47804 291 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ARRB1P49407 418 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 CSNK1EP49674 416 aaKnown RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 TAS2R38P59533 333 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 EIF3EP60228 445 aaKnown RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 RPL26P61254 145 aaKnown RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 IRX4P78413 519 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 OTUD4Q01804 1114 aaKnown RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 DSC2Q02487 901 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 CCDC173Q0VFZ6 552 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC10A2Q12908 348 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 GRIK2Q13002 908 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZNF211Q13398 564 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 PRPSAP1Q14558 356 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 SUZ12Q15022 739 aaKnown RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 PRKD1Q15139 912 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 NOMO1Q15155 1222 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZNF284Q2VY69 593 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 UAP1L1Q3KQV9 507 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 HS1BP3Q53T59 392 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 LRRC73Q5JTD7 316 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 STPG1Q5TH74 334 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 SEL1L3Q68CR1 1132 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ALG1LQ6GMV1 187 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ITPRIPL1Q6GPH6 555 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 DARS2Q6PI48 645 aaKnown RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 PTAR1Q7Z6K3 402 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZC3H18Q86VM9 953 aaKnown RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 DCP2Q8IU60 420 aaKnown RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 MINDY1Q8N5J2 469 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 MFSD2AQ8NA29 543 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 DENND6BQ8NEG7 585 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ATL2Q8NHH9 583 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 MAIP1Q8WWC4 291 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 HTR3CQ8WXA8 447 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ASB12Q8WXK4 309 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ALG3Q92685 438 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 KLK6Q92876 244 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ECHDC3Q96DC8 303 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 KLHDC7BQ96G42 594 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 HES6Q96HZ4 224 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 AGAP3Q96P47 875 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 QKIQ96PU8 341 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 MYOCQ99972 504 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms