RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 HTRA2O43464 458 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 RNASEH1O60930 286 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 ADAM23O75077 832 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 PPFIA2O75334 1257 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 PGLSO95336 258 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 NDST3O95803 873 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 CPP00450 1065 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 IL1BP01584 269 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 EPOP01588 193 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 FGF1P05230 155 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 CTSLP07711 333 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 UQCRHP07919 91 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 MLNP12872 115 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 GRIA1P42261 906 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 EPHB1P54762 984 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 SLC1A5Q15758 541 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 DNAJC21Q5F1R6 531 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 SIRPB2Q5JXA9 342 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 LRRC8BQ6P9F7 803 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 RANBP10Q6VN20 620 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 CCNI2Q6ZMN8 369 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 Q6ZS52 159 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 ZNF534Q76KX8 674 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 CCDC25Q86WR0 208 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.97■□□□□ 0.157e-6■■□□□ 11.7
TSPAN4-213ENST00000524895 RMDN1Q96DB5 314 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 KLHL32Q96NJ5 620 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 TRIB3Q96RU7 358 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 SUV39H2Q9H5I1 410 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 FBRSQ9HAH7 460 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 CASS4Q9NQ75 786 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 PIH1D1Q9NWS0 290 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 RAB21Q9UL25 225 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 MMP17Q9ULZ9 603 aa15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 MTF2Q9Y483 593 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-213ENST00000524895 A0A1W2PQ67 120 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 KPNA3O00505 521 aaPredicted RBP15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 FZD6O60353 706 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 PDHA1P08559 390 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 ATXN1LP0C7T5 689 aaKnown RBP15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 MYBL2P10244 700 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 CHRNA4P43681 627 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 PSMD8P48556 350 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 SESN2P58004 480 aaPredicted RBP15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 RPL26P61254 145 aaKnown RBP15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 SIGLEC14Q08ET2 396 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 MTM1Q13496 603 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 CEP128Q6ZU80 1094 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 CENPUQ71F23 418 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 CAND1Q86VP6 1230 aaKnown RBP15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 TMIEQ8NEW7 156 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 PIP4K2CQ8TBX8 421 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 VOPP1Q96AW1 172 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 PPP1R16AQ96I34 528 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 PWWP2AQ96N64 755 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 FAM129BQ96TA1 746 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 TSPYL1Q9H0U9 437 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 MFSD1Q9H3U5 465 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 PPM1HQ9ULR3 514 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 RPL26L1Q9UNX3 145 aaKnown RBP15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 F5P12259 2224 aa15.96■□□□□ 0.15
TSPAN4-213ENST00000524895 DCXO43602 365 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 ATG13O75143 517 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 AVILO75366 819 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 COL9A1P20849 921 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 GRIA4P48058 902 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 POM121L1PQ3SYA9 428 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 BBS9Q3SYG4 887 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 ZNF805Q5CZA5 627 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 FNBP1LQ5T0N5 605 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 FAM46CQ5VWP2 391 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 ZNF776Q68DI1 518 aaPredicted RBP15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 DENND5AQ6IQ26 1287 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 KIAA1211LQ6NV74 962 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 BRAT1Q6PJG6 821 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 CACUL1Q86Y37 369 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 MMAAQ8IVH4 418 aaKnown RBP15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 PJA1Q8NG27 643 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 OR2T3Q8NH03 318 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 ECHDC3Q96DC8 303 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 OSBPL6Q9BZF3 934 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 PHACTR1Q9C0D0 580 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 RSPH9Q9H1X1 276 aaPredicted RBP15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 ARNT2Q9HBZ2 717 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 DYRK4Q9NR20 520 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 BFARQ9NZS9 450 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 SARDHQ9UL12 918 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 ANKRD36A6QL64 1941 aa15.95■□□□□ 0.14
TSPAN4-213ENST00000524895 CKAP5Q14008 2032 aa15.94■□□□□ 0.14
TSPAN4-213ENST00000524895 A0A1W2PQF6 199 aa15.94■□□□□ 0.14
TSPAN4-213ENST00000524895 TSPAN11A1L157 253 aa15.94■□□□□ 0.14
TSPAN4-213ENST00000524895 CHURC1-FNTBB4DL54 471 aa15.94■□□□□ 0.14
TSPAN4-213ENST00000524895 EIF3HO15372 352 aaKnown RBP eCLIP15.94■□□□□ 0.14
TSPAN4-213ENST00000524895 ERLIN1O75477 346 aa15.94■□□□□ 0.14
TSPAN4-213ENST00000524895 ADH1BP00325 375 aa15.94■□□□□ 0.14
TSPAN4-213ENST00000524895 PRLP01236 227 aa15.94■□□□□ 0.14
TSPAN4-213ENST00000524895 ALADP13716 330 aa15.94■□□□□ 0.14
TSPAN4-213ENST00000524895 TPH1P17752 444 aa15.94■□□□□ 0.14
TSPAN4-213ENST00000524895 XPAP23025 273 aaPredicted RBP15.94■□□□□ 0.14
TSPAN4-213ENST00000524895 ITGB7P26010 798 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms