RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 PRPSAP1Q14558 356 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 PAFAH1B3Q15102 231 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 NEDD8Q15843 81 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 PHKG1Q16816 387 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 DGUOKQ16854 277 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 TMEM132AQ24JP5 1023 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 SEZ6Q53EL9 994 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 MEX3CQ5U5Q3 659 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 TTC23Q5W5X9 447 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 NAPEPLDQ6IQ20 393 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 TRNP1Q6NT89 227 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 PID1Q7Z2X4 250 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 AMIGO3Q86WK7 504 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 CCNYL1Q8N7R7 359 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 PAPD5Q8NDF8 572 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ABHD11Q8NFV4 315 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 UBA3Q8TBC4 463 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 HDAC2Q92769 488 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 TANKQ92844 425 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 FBXL8Q96CD0 374 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 NSMCE3Q96MG7 304 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 PPP1R2P1Q96PQ5 205 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 TRIM54Q9BYV2 358 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 KLHL25Q9H0H3 589 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 GBA3Q9H227 469 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ARMC7Q9H6L4 198 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 RNF146Q9NTX7 359 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 CCDC167Q9P0B6 97 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 KLHL8Q9P2G9 620 aaPredicted RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 XPR1Q9UBH6 696 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 KLHL3Q9UH77 587 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 SNX5Q9Y5X3 404 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 TLL2Q9Y6L7 1015 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 PTPRFP10586 1907 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 CENPBD1B2RD01 187 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 TCP10L2B9ZVM9 353 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 M0QX08 132 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ACKR2O00590 384 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 LSM1O15116 133 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 MAP3K6O95382 1288 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 RBP1P09455 135 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 GNAO1P09471 354 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 GFAPP14136 432 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 HOXB6P17509 224 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 CD247P20963 164 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 RFC2P35250 354 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ZNF135P52742 658 aaPredicted RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 AIF1P55008 147 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 SLC12A2P55011 1212 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 CDH8P55286 799 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ARPC4P59998 168 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 GNA12Q03113 381 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 CDC20Q12834 499 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 CDH17Q12864 832 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 RALGDSQ12967 914 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 NME3Q13232 169 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 BFSP2Q13515 415 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 BAATQ14032 418 aaPredicted RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 GRM3Q14832 879 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 TARBP2Q15633 366 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 FAM98CQ17RN3 349 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 FAM83EQ2M2I3 478 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 GOLGA7BQ2TAP0 167 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ARL13BQ3SXY8 428 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 CYBRD1Q53TN4 286 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 INTS6LQ5JSJ4 861 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ATF7IP2Q5U623 682 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 AGAP9Q5VTM2 703 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 PTAR1Q7Z6K3 402 aaPredicted RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 FAM83AQ86UY5 434 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ZC3HC1Q86WB0 502 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 PROSER1Q86XN7 944 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 PTRH1Q86Y79 214 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 EPHX4Q8IUS5 362 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 LACC1Q8IV20 430 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 CCDC117Q8IWD4 279 aaPredicted RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ZNF567Q8N184 647 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 TMEM151AQ8N4L1 468 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ATP6V0D2Q8N8Y2 350 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 CCNYQ8ND76 341 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 OR52K1Q8NGK4 314 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ADAM32Q8TC27 787 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 PTCD2Q8WV60 388 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 HPS1Q92902 700 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 POP5Q969H6 163 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 HDAC10Q969S8 669 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 SDCCAG3Q96C92 435 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ATXN7L3BQ96GX2 97 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 BTN2A3PQ96KV6 586 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 MARK4Q96L34 752 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 PRMT6Q96LA8 375 aaPredicted RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 FCRL3Q96P31 734 aaPredicted RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 KCTD15Q96SI1 283 aaPredicted RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 YME1L1Q96TA2 773 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 C11orf84Q9BUA3 381 aaPredicted RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 TPK1Q9H3S4 243 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 FANCEQ9HB96 536 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 VTA1Q9NP79 307 aa7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 IARS2Q9NSE4 1012 aaKnown RBP7.58□□□□□ -1.2
HMBOX1-211ENST00000524238 ZNF639Q9UID6 485 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms