RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	ACE2	Q9BYF1	805 aa	Predicted RBP	10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	TMEM216	Q9P0N5	145 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	FBXO5	Q9UKT4	447 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	EMCN	Q9ULC0	261 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZNF106	Q9H2Y7	1883 aa	Known RBP	10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	COL4A6	Q14031	1691 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	ILVBL	A1L0T0	632 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZBBX	A8MT70	800 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006		H0Y626	953 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	CBX4	O00257	560 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	PHGDH	O43175	533 aa	Known RBP	10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	SLC7A4	O43246	635 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	TRIM13	O60858	407 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	DNAJC6	O75061	913 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	SNN	O75324	88 aa	Predicted RBP	10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	RASSF9	O75901	435 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	NDST3	O95803	873 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	LATS1	O95835	1130 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	TOP3B	O95985	862 aa	Known RBP	10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	LRG1	P02750	347 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	DLD	P09622	509 aa	Known RBP	10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	FGF3	P11487	239 aa	Predicted RBP	10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	CALB2	P22676	271 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	CES1	P23141	567 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	PML	P29590	882 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	ACVRL1	P37023	503 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	ALDH18A1	P54886	795 aa	Known RBP	10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	KCNJ2	P63252	427 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	IRF9	Q00978	393 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	TNK2	Q07912	1038 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	CTBP1	Q13363	440 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	CDH18	Q13634	790 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	KRT72	Q14CN4	511 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	CNGA3	Q16281	694 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	FSCB	Q5H9T9	825 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	TMEM240	Q5SV17	173 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	ADGRF1	Q5T601	910 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	LRRC8E	Q6NSJ5	796 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZYG11A	Q6WRX3	759 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	DDX53	Q86TM3	631 aa	Known RBP	10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	C2CD4A	Q8NCU7	369 aa	Predicted RBP	10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	MRPS31	Q92665	395 aa	Known RBP	10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	RMDN1	Q96DB5	314 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	NSL1	Q96IY1	281 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	CCDC68	Q9H2F9	335 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	ARNT2	Q9HBZ2	717 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	TREX1	Q9NSU2	369 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	DNAJC28	Q9NX36	388 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	INSL5	Q9Y5Q6	135 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	SCN8A	Q9UQD0	1980 aa		10.85	□□□□□ -0.67
SPIDR-222	ENST00000524006	GRXCR1	A8MXD5	290 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006		F8W8V4	182 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	SPECC1L-ADORA2A	F8WAN1	911 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	HAX1	O00165	279 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	GYG2	O15488	501 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	KDELR3	O43731	214 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	TSPAN3	O60637	253 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	DIAPH2	O60879	1101 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	SIN3B	O75182	1162 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	LYPLA1	O75608	230 aa	Predicted RBP	10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	RPP40	O75818	363 aa	Known RBP	10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	CIB2	O75838	187 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	STC2	O76061	302 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	BAIAP3	O94812	1187 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	SNUPN	O95149	360 aa	Known RBP	10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	GJB5	O95377	273 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	SEC24A	O95486	1093 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	CBX6	O95503	412 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	ATP6V1G2	O95670	118 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	GLP2R	O95838	553 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	SLC4A1	P02730	911 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	PTPN4	P29074	926 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	SLC6A4	P31645	630 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	PBX2	P40425	430 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	GLRB	P48167	497 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	RAB33A	Q14088	237 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	GALNT3	Q14435	633 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	FAM83E	Q2M2I3	478 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	C5orf22	Q49AR2	442 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	AGAP9	Q5VTM2	703 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	LIPM	Q5VYY2	423 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	RNF219	Q5W0B1	726 aa	Predicted RBP	10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	DENND5A	Q6IQ26	1287 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	FAM45BP	Q6NSW5	357 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZNF783	Q6ZMS7	281 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	CCDC149	Q6ZUS6	474 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	ACAD11	Q709F0	780 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	LONP2	Q86WA8	852 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	DENND6A	Q8IWF6	608 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	CARNMT1	Q8N4J0	409 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	OR7D4	Q8NG98	312 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	FAM45A	Q8TCE6	357 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	KCTD4	Q8WVF5	259 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	PEX13	Q92968	403 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	USP13	Q92995	863 aa	Predicted RBP	10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	TIFA	Q96CG3	184 aa		10.84	□□□□□ -0.67

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