RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 GCNT1Q02742 428 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 ZFP36L1Q07352 338 aaKnown RBP11.76□□□□□ -0.53
SDCBP-211ENST00000523441 BIRC2Q13490 618 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 INPP5AQ14642 412 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 LRRC14Q15048 493 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 POLD3Q15054 466 aaPredicted RBP11.76□□□□□ -0.53
SDCBP-211ENST00000523441 DEFB109BQ30KR1 87 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 C5orf22Q49AR2 442 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 ZNF658Q5TYW1 1059 aaPredicted RBP11.76□□□□□ -0.53
SDCBP-211ENST00000523441 ATL3Q6DD88 541 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 C16orf46Q6P387 395 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 GDPD4Q6W3E5 623 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 PIM3Q86V86 326 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 ZNF683Q8IZ20 524 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 NRSN1Q8IZ57 195 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 UNC5BQ8IZJ1 945 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 CACNA2D3Q8IZS8 1091 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 WDTC1Q8N5D0 677 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 RAB7BQ96AH8 199 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 ARHGEF26Q96DR7 871 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 NUDT22Q9BRQ3 303 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 APOOQ9BUR5 198 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 RMND1Q9NWS8 449 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 ARHGEF38Q9NXL2 777 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.76□□□□□ -0.53
SDCBP-211ENST00000523441 PLEKHB1Q9UF11 243 aaPredicted RBP11.76□□□□□ -0.53
SDCBP-211ENST00000523441 DNAI1Q9UI46 699 aa11.76□□□□□ -0.53
SDCBP-211ENST00000523441 SPTBN1Q01082 2364 aaKnown RBP11.75□□□□□ -0.53
SDCBP-211ENST00000523441 ILVBLA1L0T0 632 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 DRGXA6NNA5 263 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 GLI1P08151 1106 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 KRT7P08729 469 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 GLB1P16278 677 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 SNRPD1P62314 119 aaKnown RBP11.75□□□□□ -0.53
SDCBP-211ENST00000523441 SLC6A3Q01959 620 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 APBA1Q02410 837 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 SERINC3Q13530 473 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 NFATC4Q14934 902 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 WSCD2Q2TBF2 565 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 MYLK3Q32MK0 819 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 C14orf28Q4W4Y0 310 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 EFHC2Q5JST6 749 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 CERCAMQ5T4B2 595 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 ATP1A1-AS1Q5TC04 95 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 NKAIN2Q5VXU1 208 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 RWDD4Q6NW29 188 aaKnown RBP11.75□□□□□ -0.53
SDCBP-211ENST00000523441 LVRNQ6Q4G3 990 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 OLFML1Q6UWY5 402 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 ATCAYQ86WG3 371 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 FAM131BQ86XD5 332 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 SLITRK4Q8IW52 837 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 GPR156Q8NFN8 814 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 OR6C4Q8NGE1 309 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 OR2AP1Q8NGE2 309 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 CCL4L1Q8NHW4 92 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 ASB12Q8WXK4 309 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 OR1E3Q8WZA6 343 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 ART4Q93070 314 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 EXOC2Q96KP1 924 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 CCDC74BQ96LY2 380 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 TBATAQ96M53 351 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 WDR92Q96MX6 357 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 CRACR2AQ9BSW2 395 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 SRRTQ9BXP5 876 aaKnown RBP11.75□□□□□ -0.53
SDCBP-211ENST00000523441 ZYG11BQ9C0D3 744 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 GDPD2Q9HCC8 539 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 NDFIP2Q9NV92 336 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 ASNSD1Q9NWL6 643 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 ANAPC2Q9UJX6 822 aa11.75□□□□□ -0.53
SDCBP-211ENST00000523441 ARHGEF17Q96PE2 2063 aaPredicted RBP11.75□□□□□ -0.53
SDCBP-211ENST00000523441 CLEC18AA5D8T8 446 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 RHPN2P1A8MT19 583 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 GOLGA8SH3BPF8 625 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 AREL1O15033 823 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 B4GAT1O43505 415 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 AGFG2O95081 481 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 CD160O95971 181 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 FGF3P11487 239 aaPredicted RBP11.74□□□□□ -0.53
SDCBP-211ENST00000523441 TIMP2P16035 220 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 CD82P27701 267 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 UGT1A3P35503 534 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 UQCRFS1P47985 274 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 CXCR3P49682 368 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 ARSDP51689 593 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 KRT85P78386 507 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 LRRC63Q05C16 580 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 SLC20A2Q08357 652 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 MTA1Q13330 715 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 PTPN20Q4JDL3 420 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 C2CD6Q53TS8 623 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 BRMS1LQ5PSV4 323 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 SPECC1LQ69YQ0 1117 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 FOXR2Q6PJQ5 311 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 CLEC18BQ6UXF7 455 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 ZSCAN30Q86W11 494 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 FAM129CQ86XR2 697 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 PAF1Q8N7H5 531 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 PLA2G15Q8NCC3 412 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 CLEC18CQ8NCF0 446 aa11.74□□□□□ -0.53
SDCBP-211ENST00000523441 TMEM159Q96B96 161 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms