RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 COPAP53621 1224 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 AP1S1P61966 158 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 SLC7A5Q01650 507 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 RPL6Q02878 288 aaKnown RBP12.05□□□□□ -0.48
PVT1-215ENST00000522963 SPEM2Q0P670 501 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 GPS1Q13098 491 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 CCDC6Q16204 474 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 ZNF776Q68DI1 518 aaPredicted RBP12.05□□□□□ -0.48
PVT1-215ENST00000522963 C8orf74Q6P047 294 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 MMAAQ8IVH4 418 aaKnown RBP12.05□□□□□ -0.48
PVT1-215ENST00000522963 FAM129BQ96TA1 746 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 HEPHQ9BQS7 1158 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 MLPHQ9BV36 600 aaPredicted RBP12.05□□□□□ -0.48
PVT1-215ENST00000522963 ZDHHC6Q9H6R6 413 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 ETNK1Q9HBU6 452 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 RAB6BQ9NRW1 208 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 UBP1Q9NZI7 540 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 ASIC3Q9UHC3 531 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 MBD1Q9UIS9 605 aaPredicted RBP12.05□□□□□ -0.48
PVT1-215ENST00000522963 IGHV1OR15-9A0A0B4J2B8 117 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 PIGNO95427 931 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 POP4O95707 220 aaKnown RBP12.04□□□□□ -0.48
PVT1-215ENST00000522963 MT-CYBP00156 380 aaPredicted RBP12.04□□□□□ -0.48
PVT1-215ENST00000522963 CTSLP07711 333 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 IVDP26440 423 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 FDFT1P37268 417 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 PSMD8P48556 350 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 TERF1P54274 439 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 RPS14P62263 151 aaKnown RBP12.04□□□□□ -0.48
PVT1-215ENST00000522963 CREB5Q02930 508 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 SEMA5AQ13591 1074 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 PRPSAP1Q14558 356 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 RALGPS1Q5JS13 557 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 KDELC1Q6UW63 502 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 C4orf22Q6V702 233 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 LPCAT2Q7L5N7 544 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 C11orf74Q86VG3 221 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 CAMK1DQ8IU85 385 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 KLHDC8BQ8IXV7 354 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 KIAA2013Q8IYS2 634 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 CCHCR1Q8TD31 782 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 OR8D1Q8WZ84 308 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 ERP44Q9BS26 406 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 TRIM31Q9BZY9 425 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 ARRDC1-AS1Q9H2J1 176 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 FAM153AQ9UHL3 310 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
PVT1-215ENST00000522963 WASF2Q9Y6W5 498 aa12.04□□□□□ -0.48
PVT1-215ENST00000522963 PLXND1Q9Y4D7 1925 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.03□□□□□ -0.48
PVT1-215ENST00000522963 EFCAB8A8MWE9 144 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 ALOX15BO15296 676 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 MID1O15344 667 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 PMPCBO75439 489 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 LEFTY1O75610 366 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 IL1BP01584 269 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 RETP07949 1114 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 SERPINF2P08697 491 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 CD6P30203 668 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 HOXD11P31277 338 aaPredicted RBP12.03□□□□□ -0.48
PVT1-215ENST00000522963 ADCY8P40145 1251 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 PI4KAP42356 2102 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 MAPK8P45983 427 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 TPMTP51580 245 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 GEMP55040 296 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 WNT3AP56704 352 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 BASP1P80723 227 aaKnown RBP12.03□□□□□ -0.48
PVT1-215ENST00000522963 RAD51Q06609 339 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 TRAF2Q12933 501 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 OLIG2Q13516 323 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 ELAVL3Q14576 367 aaKnown RBP12.03□□□□□ -0.48
PVT1-215ENST00000522963 SLC14A2Q15849 920 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 POM121L1PQ3SYA9 428 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 TTC31Q49AM3 519 aaPredicted RBP12.03□□□□□ -0.48
PVT1-215ENST00000522963 GLE1Q53GS7 698 aaKnown RBP12.03□□□□□ -0.48
PVT1-215ENST00000522963 ARSIQ5FYB1 569 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 TEX35Q5T0J7 233 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 SYCP2LQ5T4T6 812 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 PMS2CLQ68D20 193 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 DUPD1Q68J44 220 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 KCTD11Q693B1 232 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 SLC36A4Q6YBV0 504 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 GRIN3AQ8TCU5 1115 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 PIGKQ92643 395 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 TOE1Q96GM8 510 aaKnown RBP12.03□□□□□ -0.48
PVT1-215ENST00000522963 ZC3H10Q96K80 434 aaKnown RBP12.03□□□□□ -0.48
PVT1-215ENST00000522963 MRGPRX2Q96LB1 330 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 TUBGCP5Q96RT8 1024 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 GPR174Q9BXC1 333 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 CPEB1Q9BZB8 566 aaKnown RBP12.03□□□□□ -0.48
PVT1-215ENST00000522963 DPH5Q9H2P9 285 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 SMOC1Q9H4F8 434 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 FBRSQ9HAH7 460 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 ITM2CQ9NQX7 267 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 IL36AQ9UHA7 158 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 DMGDHQ9UI17 866 aaKnown RBP12.03□□□□□ -0.48
PVT1-215ENST00000522963 SARDHQ9UL12 918 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 PPM1HQ9ULR3 514 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 SNX24Q9Y343 169 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 PCDHGC4Q9Y5F7 938 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms