RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 PITRM1Q5JRX3 1037 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 GPRIN3Q6ZVF9 776 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ERMP1Q7Z2K6 904 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 TDRPQ86YL5 185 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 CNTD1Q8N815 330 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 LRRC57Q8N9N7 239 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 GRIN3AQ8TCU5 1115 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 TRPM4Q8TD43 1214 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ART4Q93070 314 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 MTFMTQ96DP5 389 aaKnown RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 NMUR2Q9GZQ4 415 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 KCNH7Q9NS40 1196 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 GJB4Q9NTQ9 266 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 COA4Q9NYJ1 87 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 TMEM216Q9P0N5 145 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 TRMT6Q9UJA5 497 aaKnown RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 RIMS3Q9UJD0 308 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 CDV3Q9UKY7 258 aaKnown RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 COPS3Q9UNS2 423 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 NAALADL1Q9UQQ1 740 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 BOLA1Q9Y3E2 137 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 PPLO60437 1756 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 XRN1Q8IZH2 1706 aaKnown RBP8.35□□□□□ -1.07
HMGB4-204ENST00000522796 LINC00862A6NCI5 91 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 VSTM5A8MXK1 200 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 FOXO6A8MYZ6 492 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 EYA2O00167 538 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 GPR171O14626 319 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 DNALI1O14645 258 aaPredicted RBP8.35□□□□□ -1.07
HMGB4-204ENST00000522796 PIAS2O75928 621 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 PTTG1O95997 202 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 CBLP22681 906 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 GRIA3P42263 894 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 RPL21P46778 160 aaKnown RBP8.35□□□□□ -1.07
HMGB4-204ENST00000522796 PRIM2P49643 509 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 CPT1AP50416 773 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 CDH15P55291 814 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 SLC26A5P58743 744 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 PPP1R3AQ16821 1122 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 MPP7Q5T2T1 576 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 KRT40Q6A162 431 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 ZFP1Q6P2D0 407 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 PRMT9Q6P2P2 845 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 BRAT1Q6PJG6 821 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 CYFIP1Q7L576 1253 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 CCDC60Q8IWA6 550 aaPredicted RBP8.35□□□□□ -1.07
HMGB4-204ENST00000522796 RCOR2Q8IZ40 523 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 ZCCHC7Q8N3Z6 543 aaKnown RBP8.35□□□□□ -1.07
HMGB4-204ENST00000522796 LIX1Q8N485 282 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 CCDC185Q8N715 623 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 TTLL6Q8N841 843 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 GLIS1Q8NBF1 620 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 C11orf65Q8NCR3 313 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 OR56B2PQ8NGI1 322 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 DNAJB8Q8NHS0 232 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 RAB2BQ8WUD1 216 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 TIFAQ96CG3 184 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 EDC3Q96F86 508 aaKnown RBP8.35□□□□□ -1.07
HMGB4-204ENST00000522796 RNF170Q96K19 258 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 SLC19A3Q9BZV2 496 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 SUV39H2Q9H5I1 410 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 CDHR5Q9HBB8 845 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 PCDHB16Q9NRJ7 776 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 ZIM2Q9NZV7 527 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 ARHGAP28Q9P2N2 729 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 SRP68Q9UHB9 627 aaKnown RBP8.35□□□□□ -1.07
HMGB4-204ENST00000522796 ANKRD6Q9Y2G4 727 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 HRH3Q9Y5N1 445 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 ACTL7AQ9Y615 435 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 SLC22A7Q9Y694 548 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 DGAT1O75907 488 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 GOSR1O95249 250 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 FABP1P07148 127 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 HBQ1P09105 142 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 DLDP09622 509 aaKnown RBP8.35□□□□□ -1.07
HMGB4-204ENST00000522796 COX5BP10606 129 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 BMP1P13497 986 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 IFNAR1P17181 557 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 PTPN1P18031 435 aaKnown RBP8.35□□□□□ -1.07
HMGB4-204ENST00000522796 HMGCLP35914 325 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 GRM5P41594 1212 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 GSTM5P46439 218 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 FNTBP49356 437 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 MEOX2P50222 304 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 DGKQP52824 942 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 RAD23AP54725 363 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 CHAF1BQ13112 559 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 PMS2P3Q13401 168 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 Q5BKY6 102 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 PYHIN1Q6K0P9 492 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 CNNM4Q6P4Q7 775 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 GADL1Q6ZQY3 521 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 USP49Q70CQ1 688 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 UTS2BQ765I0 119 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 ZBTB33Q86T24 672 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 ZBTB46Q86UZ6 589 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 PLD5Q8N7P1 536 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 TMEM35BQ8NCS4 154 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 C3orf58Q8NDZ4 430 aa8.35□□□□□ -1.07
HMGB4-204ENST00000522796 PXYLP1Q8TE99 480 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms