RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 AP3D1O14617 1153 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 MSI1O43347 362 aaKnown RBP4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 TLR2O60603 784 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 CSPG5O95196 566 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 TFP02787 698 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 RARGP13631 454 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 SRD5A1P18405 259 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 GABRB1P18505 474 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 YWHAQP27348 245 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 SKIV2L2P42285 1042 aaKnown RBP4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 CLCNKBP51801 687 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 GALNT3Q14435 633 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 RAB41Q5JT25 222 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 TMEM268Q5VZI3 342 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 KLHL35Q6PF15 583 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 FAM83HQ6ZRV2 1179 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 IRF2BP2Q7Z5L9 587 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 PRPF39Q86UA1 669 aaKnown RBP4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 DHX40Q8IX18 779 aaKnown RBP4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 ZDHHC23Q8IYP9 409 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 TMTC2Q8N394 836 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 SRBD1Q8N5C6 995 aaKnown RBP4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 C9orf106Q8NAJ2 232 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 DNAAF1Q8NEP3 725 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 PIGOQ8TEQ8 1089 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 MSI2Q96DH6 328 aaKnown RBP4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 IFT27Q9BW83 186 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 ASAH2Q9NR71 780 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 RNF146Q9NTX7 359 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 PLK2Q9NYY3 685 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 AGO2Q9UKV8 859 aaKnown RBP4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 PCDHGB5Q9Y5G0 923 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 ZNF335Q9H4Z2 1342 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 HSPB2A8KAH6 182 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 RNMTO43148 476 aaKnown RBP4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 TLX3O43711 291 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 CBX6O95503 412 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 CTSAP10619 480 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 RRM1P23921 792 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 PSMC6P62333 389 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 YWHAZP63104 245 aaKnown RBP4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 ID2Q02363 134 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 GRIK3Q13003 919 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 OLIG2Q13516 323 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 HSPB2Q16082 182 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 DPCR1Q3MIW9 517 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 MIDNQ504T8 468 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 AWAT2Q6E213 333 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 ISM2Q6H9L7 571 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 ZNF280DQ6N043 979 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 RPUSD3Q6P087 351 aaKnown RBP4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 AAGABQ6PD74 315 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 DLK2Q6UY11 383 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 CFAP77Q6ZQR2 320 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 HMCESQ96FZ2 354 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 PGAM5Q96HS1 289 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 C1orf74Q96LT6 269 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 FIZ1Q96SL8 496 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 H2AFJQ9BTM1 129 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 TXLNGYQ9BZA5 131 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 TKTL2Q9H0I9 626 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 PAPOLBQ9NRJ5 636 aaKnown RBP4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 SLC6A13Q9NSD5 602 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 SUCLA2Q9P2R7 463 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 PCDHGB4Q9UN71 923 aa4.89□□□□□ -1.63
HMGB1P1-201ENST00000522557 A0A1W2PR77 199 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 USP17L23D6RBM5 183 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 SOCS2O14508 198 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 SCAMP1O15126 338 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 P4HA2O15460 535 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 TMCC1O94876 653 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 DNTTP04053 509 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 AGAP20933 346 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 NFKBIAP25963 317 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 POU1F1P28069 291 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 HOXA13P31271 388 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 DCTDP32321 178 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 DPP6P42658 865 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 CPA2P48052 419 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 PLCD1P51178 756 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 CHAF1BQ13112 559 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 STIM1Q13586 685 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 TTC39AQ5SRH9 613 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 QSOX2Q6ZRP7 698 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 TECPR1Q7Z6L1 1165 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 MRPL10Q7Z7H8 261 aaKnown RBP4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 PIP4P1Q86T03 277 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 SERPINA11Q86U17 422 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 GPAT4Q86UL3 456 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 TMC8Q8IU68 726 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 GTF3C6Q969F1 213 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 FEM1CQ96JP0 617 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 WDR83Q9BRX9 315 aaKnown RBP4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 MXD3Q9BW11 206 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 WDR26Q9H7D7 661 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 PNRC2Q9NPJ4 139 aaKnown RBP4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 DDX4Q9NQI0 724 aaKnown RBP4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 BABAM1Q9NWV8 329 aa4.88□□□□□ -1.63
HMGB1P1-201ENST00000522557 LAMP3Q9UQV4 416 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms