RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 TMEM209Q96SK2 561 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 TCF25Q9BQ70 676 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 IFIH1Q9BYX4 1025 aaKnown RBP4.11□□□□□ -1.75
SKP1-209ENST00000522552 SMOC2Q9H3U7 446 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 COQ10BQ9H8M1 238 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 TUFT1Q9NNX1 390 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 DDX4Q9NQI0 724 aaKnown RBP4.11□□□□□ -1.75
SKP1-209ENST00000522552 SLC22A11Q9NSA0 550 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 MTMR4Q9NYA4 1195 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 FAM30AQ9NZY2 134 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 SLAMF8Q9P0V8 285 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 TRPC4Q9UBN4 977 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 CNOT8Q9UFF9 292 aaKnown RBP4.11□□□□□ -1.75
SKP1-209ENST00000522552 FBXW2Q9UKT8 454 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 NDRG4Q9ULP0 352 aaKnown RBP4.11□□□□□ -1.75
SKP1-209ENST00000522552 GABRQQ9UN88 632 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 SORCS3Q9UPU3 1222 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 SSX2IPQ9Y2D8 614 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 SNX9Q9Y5X1 595 aa4.11□□□□□ -1.75
SKP1-209ENST00000522552 COPG1Q9Y678 874 aaKnown RBP4.11□□□□□ -1.75
SKP1-209ENST00000522552 EIF4G1Q04637 1599 aaKnown RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 A0A087WV48 116 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 CYP2D7A0A087X1C5 515 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 ARPC4-TTLL3A0A0A6YYG9 625 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 TCAF2A6NFQ2 919 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 LACTBL1A8MY62 500 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 RASGRF2O14827 1237 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 SLC30A4O14863 429 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 ANGPT2O15123 496 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 PJA2O43164 708 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 NDUFS3O75489 264 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 RAD17O75943 681 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 PRAMEF12O95522 483 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 TGFAP01135 160 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 F13BP05160 661 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 MMP9P14780 707 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 CTPS1P17812 591 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 TNFRSF1AP19438 455 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 ADORA2AP29274 412 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 EPHA3P29320 983 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 HSPA1LP34931 641 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 ARL4AP40617 200 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 MDH1P40925 334 aaKnown RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 FASLGP48023 281 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 CD151P48509 253 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 DHPSP49366 369 aaPredicted RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 CLK3P49761 638 aaKnown RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 GZMKP49863 264 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 IRAK1P51617 712 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 GFPT1Q06210 699 aaPredicted RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 KIF5AQ12840 1032 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 SNX1Q13596 522 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 CBFBQ13951 182 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 GAMTQ14353 236 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 MXD4Q14582 209 aaPredicted RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 RTP5Q14D33 572 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 SGCBQ16585 318 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 IMMTQ16891 758 aaKnown RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 AASDHQ4L235 1098 aaPredicted RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 GLE1Q53GS7 698 aaKnown RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 STXBP5Q5T5C0 1151 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 SFMBT2Q5VUG0 894 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 SHEQ5VZ18 495 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 PMS2CLQ68D20 193 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 ANKS6Q68DC2 871 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 RGS7BPQ6MZT1 257 aaPredicted RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 RBM43Q6ZSC3 357 aaKnown RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 PTCHD4Q6ZW05 846 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 SPATA21Q7Z572 469 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 TADA2BQ86TJ2 420 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 ZDHHC13Q8IUH4 622 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 CDH26Q8IXH8 852 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 SLC15A3Q8IY34 581 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 CLYBLQ8N0X4 340 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 SYNE4Q8N205 404 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 GUF1Q8N442 669 aaKnown RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 FITM2Q8N6M3 262 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 BEND2Q8NDZ0 799 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 NSUN7Q8NE18 718 aaKnown RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 OR6C4Q8NGE1 309 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 OR52E1Q8NGJ3 308 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 CFAP61Q8NHU2 1237 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 NETO1Q8TDF5 533 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 LPGAT1Q92604 370 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 GCDHQ92947 438 aaPredicted RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 SAMD8Q96LT4 415 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 HNRNPABQ99729 332 aaKnown RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 SMOQ99835 787 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 PTDSS2Q9BVG9 487 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 OSBPL8Q9BZF1 889 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 MTMR12Q9C0I1 747 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 NUAK2Q9H093 628 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 LRRC4CQ9HCJ2 640 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 PRMT8Q9NR22 394 aaPredicted RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 DNAJC11Q9NVH1 559 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 DNAJC17Q9NVM6 304 aaKnown RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 C6orf203Q9P0P8 240 aaPredicted RBP4.1□□□□□ -1.75
SKP1-209ENST00000522552 TMEM59LQ9UK28 342 aa4.1□□□□□ -1.75
SKP1-209ENST00000522552 A4GNTQ9UNA3 340 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms