RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 LAYNQ6UX15 382 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 USP30Q70CQ3 517 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 ERN2Q76MJ5 926 aaKnown RBP6.77□□□□□ -1.33
CDH12-208ENST00000522262 ACTRT1Q8TDG2 376 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 SPOCK2Q92563 424 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 ATOH1Q92858 354 aaPredicted RBP6.77□□□□□ -1.33
CDH12-208ENST00000522262 SGSM3Q96HU1 749 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 ZC3H10Q96K80 434 aaKnown RBP6.77□□□□□ -1.33
CDH12-208ENST00000522262 CAPZA3Q96KX2 299 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 MRGPRX2Q96LB1 330 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 GLOD4Q9HC38 313 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 RAI2Q9Y5P3 530 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 FADS3Q9Y5Q0 445 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 CEP250Q9BV73 2442 aa6.77□□□□□ -1.33
CDH12-208ENST00000522262 NPIPB15A6NHN6 443 aaPredicted RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 ALPIP09923 528 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 ATXN1LP0C7T5 689 aaKnown RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 TGM1P22735 817 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 ITPKAP23677 461 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 CHRNA4P43681 627 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 PTPN5P54829 565 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 RPL6Q02878 288 aaKnown RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 BYSLQ13895 437 aaKnown RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 ANKRD20A2Q5SQ80 823 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 SYCP2LQ5T4T6 812 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 ANKRD20A1Q5TYW2 823 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 ANKRD20A3Q5VUR7 823 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 DARS2Q6PI48 645 aaKnown RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 RFLNAQ6ZTI6 216 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 ASCL5Q7RTU5 278 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 KDELC2Q7Z4H8 507 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 TSPAN33Q86UF1 283 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 TAB3Q8N5C8 712 aaPredicted RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 OR14C36Q8NHC7 312 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 BIRC7Q96CA5 298 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 NAPGQ99747 312 aaPredicted RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 PCDH12Q9NPG4 1184 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 SCUBE2Q9NQ36 999 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 FSCN3Q9NQT6 498 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 PRDM4Q9UKN5 801 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 FZD4Q9ULV1 537 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 CHKBQ9Y259 395 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 CA5BQ9Y2D0 317 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 TMEM131Q92545 1883 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 PRR23AA6NEV1 266 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 FAM47DPA6NHR8 397 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 A8MX80 341 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 C1QTNF3-AMACRE9PGA6 284 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 RAD51BO15315 384 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 ZNF217O75362 1048 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 PGLSO95336 258 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 SEMA4FO95754 770 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 ACADMP11310 421 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 AP1S1P61966 158 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 ITKQ08881 620 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 MSLNQ13421 630 aaPredicted RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 GALNT3Q14435 633 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 CYP1B1Q16678 543 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 UGP2Q16851 508 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 TMEM259Q4ZIN3 620 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 USP39Q53GS9 565 aaKnown RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 CCDC181Q5TID7 509 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 KLK6Q92876 244 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 HSPA12BQ96MM6 686 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 SPATA13Q96N96 652 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 TUBGCP5Q96RT8 1024 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 OMDQ99983 421 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 SLC25A51Q9H1U9 297 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 GBA3Q9H227 469 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 DKK3Q9UBP4 350 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 SMG5Q9UPR3 1016 aaKnown RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 COQ6Q9Y2Z9 468 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 PCDHB9Q9Y5E1 797 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 C5orf60A6NFR6 353 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 PATE3B3GLJ2 98 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 CES2O00748 559 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 RIOK3O14730 519 aaKnown RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 AURKAO14965 403 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 LATO43561 262 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 RNASEH1O60930 286 aaKnown RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 PRLRP16471 622 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 CTPS1P17812 591 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 MAT2AP31153 395 aaKnown RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 ADRA1AP35348 466 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 MMP12P39900 470 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 RECQLP46063 649 aaPredicted RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 NEK3P51956 506 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 BCL2L1Q07817 233 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 SIM2Q14190 667 aaPredicted RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 CCNG2Q16589 344 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 ZNF284Q2VY69 593 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 KCTD11Q693B1 232 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 TCEAL6Q6IPX3 200 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 DRICH1Q6PGQ1 229 aaPredicted RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 PRR23BQ6ZRT6 265 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 CBARPQ8N350 705 aaPredicted RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 DCLK2Q8N568 766 aa6.76□□□□□ -1.33
CDH12-208ENST00000522262 C12orf50Q8NA57 414 aaPredicted RBP6.76□□□□□ -1.33
CDH12-208ENST00000522262 TCEAL3Q969E4 200 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms