RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 LPCAT1Q8NF37 534 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 RPLP0P6Q8NHW5 317 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 FEM1CQ96JP0 617 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 KLHL32Q96NJ5 620 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 SUV39H2Q9H5I1 410 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 SMAPO00193 183 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 HTRA2O43464 458 aaPredicted RBP13.49□□□□□ -0.25
CLK4-210ENST00000522136 FZD6O60353 706 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 NDST3O95803 873 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 PRKCGP05129 697 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 TUBBP07437 444 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 PIRTP0C851 137 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 MGAT1P26572 445 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 SERPINA4P29622 427 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 MAGEA3P43357 314 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 MRPS21P82921 87 aaKnown RBP13.49□□□□□ -0.25
CLK4-210ENST00000522136 DHX9Q08211 1270 aaKnown RBP13.49□□□□□ -0.25
CLK4-210ENST00000522136 PDIA2Q13087 525 aaKnown RBP13.49□□□□□ -0.25
CLK4-210ENST00000522136 GDPD4Q6W3E5 623 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 PAF1Q8N7H5 531 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 AENQ8WTP8 325 aaKnown RBP13.49□□□□□ -0.25
CLK4-210ENST00000522136 OR8D1Q8WZ84 308 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 TUBGCP5Q96RT8 1024 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 WDR83Q9BRX9 315 aaKnown RBP13.49□□□□□ -0.25
CLK4-210ENST00000522136 FAM129AQ9BZQ8 928 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 LMAN1LQ9HAT1 526 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 SAYSD1Q9NPB0 183 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 LTB4R2Q9NPC1 389 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 A0A0U1RQS6 177 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 KANSL1LA0AUZ9 987 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 FAM170BA6NMN3 283 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 NPC1O15118 1278 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 PGLSO95336 258 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 COL9A1P20849 921 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 CDH17Q12864 832 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 FZD5Q13467 585 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 ELAVL3Q14576 367 aaKnown RBP13.49□□□□□ -0.25
CLK4-210ENST00000522136 FBXO43Q4G163 708 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 UBAP2Q5T6F2 1119 aaKnown RBP13.49□□□□□ -0.25
CLK4-210ENST00000522136 ARMC12Q5T9G4 340 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 SDE2Q6IQ49 451 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 CACUL1Q86Y37 369 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 ANKMY2Q8IV38 441 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 IGDCC3Q8IVU1 814 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 PDIK1LQ8N165 341 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 KCNV2Q8TDN2 545 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 RMDN1Q96DB5 314 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 SHDQ96IW2 340 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 GABRG3Q99928 467 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 ARNT2Q9HBZ2 717 aa13.49□□□□□ -0.25
CLK4-210ENST00000522136 XAB2Q9HCS7 855 aaKnown RBP13.49□□□□□ -0.25
CLK4-210ENST00000522136 A0A1W2PQF6 199 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 STK25O00506 426 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 SYNCRIPO60506 623 aaKnown RBP13.48□□□□□ -0.25
CLK4-210ENST00000522136 SOCS5O75159 536 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 PPFIA2O75334 1257 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 IL1BP01584 269 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 EPOP01588 193 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 MLNP12872 115 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 HOXB2P14652 356 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 CTPS1P17812 591 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 CAMK2GQ13555 558 aaPredicted RBP13.48□□□□□ -0.25
CLK4-210ENST00000522136 QPCTQ16769 361 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 CCDC38Q502W7 563 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 LRRC73Q5JTD7 316 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 CENPUQ71F23 418 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 MMAAQ8IVH4 418 aaKnown RBP13.48□□□□□ -0.25
CLK4-210ENST00000522136 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLK4-210ENST00000522136 PIP4K2CQ8TBX8 421 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 PIH1D2Q8WWB5 315 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 SIGLEC10Q96LC7 697 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 ZNF641Q96N77 438 aaPredicted RBP13.48□□□□□ -0.25
CLK4-210ENST00000522136 TRIM56Q9BRZ2 755 aaKnown RBP13.48□□□□□ -0.25
CLK4-210ENST00000522136 TBC1D17Q9HA65 648 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 SYBUQ9NX95 663 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 PPM1HQ9ULR3 514 aa13.48□□□□□ -0.25
CLK4-210ENST00000522136 ARIH1Q9Y4X5 557 aaPredicted RBP13.48□□□□□ -0.25
CLK4-210ENST00000522136 E7ESA3 106 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 PLK4O00444 970 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 KPNA3O00505 521 aaPredicted RBP13.47□□□□□ -0.25
CLK4-210ENST00000522136 ALPIP09923 528 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 HLA-DPA1P20036 260 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 CA4P22748 312 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 ELK3P41970 407 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 TNNT3P45378 269 aaPredicted RBP13.47□□□□□ -0.25
CLK4-210ENST00000522136 EPHB1P54762 984 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 ZXDAP98168 799 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 SEMG2Q02383 582 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 MSLNQ13421 630 aaPredicted RBP13.47□□□□□ -0.25
CLK4-210ENST00000522136 GRM3Q14832 879 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 POU6F1Q14863 301 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 BRD3Q15059 726 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 E2F5Q15329 346 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 ZBED8Q8IZ13 594 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 ECHDC3Q96DC8 303 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 C9orf72Q96LT7 481 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 ADGRE3Q9BY15 652 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 FRMD8Q9BZ67 464 aaPredicted RBP13.47□□□□□ -0.25
CLK4-210ENST00000522136 FOXP3Q9BZS1 431 aa13.47□□□□□ -0.25
CLK4-210ENST00000522136 SLC6A17Q9H1V8 727 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms