RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 VPS45Q9NRW7 570 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 CACNA2D2Q9NY47 1150 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 IL1RAPL1Q9NZN1 696 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 LOC285095A0A1B0GVY8 99 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 SMAPO00193 183 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 ATP5BP06576 529 aaKnown RBP15.18■□□□□ 0.02
SREK1-209ENST00000520953 CD72P21854 359 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 PRKCHP24723 683 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 SLC8A1P32418 973 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 HPDP32754 393 aaPredicted RBP15.18■□□□□ 0.02
SREK1-209ENST00000520953 CDK18Q07002 472 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 PON2Q15165 354 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 NAPEPLDQ6IQ20 393 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 CASC4Q6P4E1 433 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 GRIN3AQ8TCU5 1115 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 PYROXD1Q8WU10 500 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 PTPRN2Q92932 1015 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 P2RY13Q9BPV8 354 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 FOXP3Q9BZS1 431 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 ZDHHC6Q9H6R6 413 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 BCCIPQ9P287 314 aaKnown RBP eCLIP15.18■□□□□ 0.02
SREK1-209ENST00000520953 LOC730098B7Z3J9 87 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 K7EQS6 105 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 NDC80O14777 642 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 TTC4O95801 387 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 IGSF6O95976 241 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 IVLP07476 585 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 CTSLP07711 333 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 MLNP12872 115 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 GRIA2P42262 883 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 IL12RB1P42701 662 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 SARNPP82979 210 aaKnown RBP15.18■□□□□ 0.02
SREK1-209ENST00000520953 GUCY1A3Q02108 690 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 SEMG2Q02383 582 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 CDH17Q12864 832 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 MSLNQ13421 630 aaPredicted RBP15.18■□□□□ 0.02
SREK1-209ENST00000520953 MYLK3Q32MK0 819 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 POM121L1PQ3SYA9 428 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 FNDC3BQ53EP0 1204 aaKnown RBP15.18■□□□□ 0.02
SREK1-209ENST00000520953 CARD16Q5EG05 197 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 IFT43Q96FT9 208 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 PCDHB9Q9Y5E1 797 aa15.18■□□□□ 0.02
SREK1-209ENST00000520953 TRAFD1O14545 582 aaPredicted RBP15.17■□□□□ 0.02
SREK1-209ENST00000520953 EGFP01133 1207 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 EFTUD2Q15029 972 aaKnown RBP eCLIP15.17■□□□□ 0.022e-11■□□□□ 10
SREK1-209ENST00000520953 LRRC73Q5JTD7 316 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 RELL1Q8IUW5 271 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 PCDH20Q8N6Y1 951 aaKnown RBP15.17■□□□□ 0.02
SREK1-209ENST00000520953 LPCAT1Q8NF37 534 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 ISG20Q96AZ6 181 aaKnown RBP15.17■□□□□ 0.02
SREK1-209ENST00000520953 FCRL3Q96P31 734 aaPredicted RBP15.17■□□□□ 0.02
SREK1-209ENST00000520953 EBNA1BP2Q99848 306 aaKnown RBP15.17■□□□□ 0.02
SREK1-209ENST00000520953 CEP44Q9C0F1 390 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 CHRAC1Q9NRG0 131 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 NOVA2Q9UNW9 492 aaKnown RBP15.17■□□□□ 0.02
SREK1-209ENST00000520953 PLA2G4CQ9UP65 541 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 SPO11Q9Y5K1 396 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 SDR42E2A6NKP2 422 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 AURKAO14965 403 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 PSMD3O43242 534 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 BUD23O43709 281 aaKnown RBP15.17■□□□□ 0.02
SREK1-209ENST00000520953 CPP00450 1065 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 APODP05090 189 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 F7P08709 466 aaPredicted RBP15.17■□□□□ 0.02
SREK1-209ENST00000520953 EIF2DP41214 584 aaKnown RBP15.17■□□□□ 0.02
SREK1-209ENST00000520953 METAP1P53582 386 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 SNRPD1P62314 119 aaKnown RBP15.17■□□□□ 0.02
SREK1-209ENST00000520953 PTPRCAPQ14761 206 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 SKIDA1Q1XH10 827 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 FSTL4Q6MZW2 842 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 TRMT10BQ6PF06 316 aaKnown RBP15.17■□□□□ 0.02
SREK1-209ENST00000520953 UNC5AQ6ZN44 842 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 LINC00523Q86TU6 105 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 FEM1CQ96JP0 617 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 VPS37BQ9H9H4 285 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 ZC3H7BQ9UGR2 993 aaKnown RBP15.17■□□□□ 0.02
SREK1-209ENST00000520953 KCTD3Q9Y597 815 aa15.17■□□□□ 0.02
SREK1-209ENST00000520953 A6NNZ2 444 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 GSRP00390 522 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 ASLP04424 464 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 UGT2B4P06133 528 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 SRPRAP08240 638 aaKnown RBP15.16■□□□□ 0.02
SREK1-209ENST00000520953 CHRM1P11229 460 aaPredicted RBP15.16■□□□□ 0.02
SREK1-209ENST00000520953 CTPS1P17812 591 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 AP1S1P61966 158 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 TUBB8Q3ZCM7 444 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 TRMT10CQ7L0Y3 403 aaKnown RBP15.16■□□□□ 0.02
SREK1-209ENST00000520953 TLCD1Q96CP7 247 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 MFSD3Q96ES6 412 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 STAMBPL1Q96FJ0 436 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 TMEM245Q9H330 911 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 RABEP2Q9H5N1 569 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 SLC17A6Q9P2U8 582 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 SLC2A6Q9UGQ3 507 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 WASF2Q9Y6W5 498 aa15.16■□□□□ 0.02
SREK1-209ENST00000520953 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.15■□□□□ 0.02
SREK1-209ENST00000520953 FZD6O60353 706 aa15.15■□□□□ 0.02
SREK1-209ENST00000520953 SIN3BO75182 1162 aa15.15■□□□□ 0.02
SREK1-209ENST00000520953 NDST3O95803 873 aa15.15■□□□□ 0.02
SREK1-209ENST00000520953 ALPIP09923 528 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms