RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SIN3AQ96ST3 1273 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 MXRA8Q9BRK3 442 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 TUBB6Q9BUF5 446 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 FBXL17Q9UF56 701 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 GIMAP2Q9UG22 337 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 UTS2RQ9UKP6 389 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZNF644Q9H582 1327 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 A0A0U1RQF3 1178 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 FAM237AA0A1B0GTK4 181 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 GLOD5A6NK44 160 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 IFNL4K9M1U5 179 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 UGDHO60701 494 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZNF182P17025 639 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 SRD5A1P18405 259 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 SLC15A1P46059 708 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 RPS13P62277 151 aaKnown RBP5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZBED6P86452 979 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 TFAP4Q01664 338 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 CDC16Q13042 620 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 USP41Q3LFD5 358 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 MIDNQ504T8 468 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 SPECC1Q5M775 1068 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 ENTPD8Q5MY95 495 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 TDRPQ86YL5 185 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 DENND6AQ8IWF6 608 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZCCHC9Q8N567 271 aaKnown RBP5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 RASSF8Q8NHQ8 419 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 PRPF31Q8WWY3 499 aaKnown RBP5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 OTULINQ96BN8 352 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 FBXL8Q96CD0 374 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZC3HAV1LQ96H79 300 aaKnown RBP5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZNF419Q96HQ0 510 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 SLITRK1Q96PX8 696 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 FAM118BQ9BPY3 351 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 SH2D3AQ9BRG2 576 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 WDR83Q9BRX9 315 aaKnown RBP5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 CDT1Q9H211 546 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 RANGRFQ9HD47 186 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 BPIFA1Q9NP55 256 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 OGFRQ9NZT2 677 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 NDRG3Q9UGV2 375 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZNF711Q9Y462 761 aa5.51□□□□□ -1.53
HMGB1P46-201ENST00000520062 WDR17Q8IZU2 1322 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 H7C0S8 307 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 MASP2O00187 686 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 ADAM20O43506 726 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 SRPRAP08240 638 aaKnown RBP5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 ITGAXP20702 1163 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 AGAP20933 346 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 LMAN1P49257 510 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 CAMPP49913 170 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 HSD17B4P51659 736 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 INHBCP55103 352 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 GRIK3Q13003 919 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 PCLAFQ15004 111 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 COL28A1Q2UY09 1125 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZSCAN23Q3MJ62 389 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 KIAA0930Q6ICG6 404 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 PCSK4Q6UW60 755 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 PTF1AQ7RTS3 328 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 LURAP1LQ8IV03 231 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 RNF168Q8IYW5 571 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 GALNT16Q8N428 558 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 GJC3Q8NFK1 279 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 HASPINQ8TF76 798 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 SLC22A18Q96BI1 424 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 SAT2Q96F10 170 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 RADILQ96JH8 1075 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 FIZ1Q96SL8 496 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 SEPT5Q99719 369 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 C1QTNF1Q9BXJ1 281 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 MRPL1Q9BYD6 325 aaKnown RBP5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 SLC35C2Q9NQQ7 365 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 ANKRD10Q9NXR5 420 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 CNOT8Q9UFF9 292 aaKnown RBP5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 SEC63Q9UGP8 760 aaKnown RBP5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 RAP2CQ9Y3L5 183 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 LSM4Q9Y4Z0 139 aaKnown RBP5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 FAM169AQ9Y6X4 670 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 A3GALT2U3KPV4 340 aa5.5□□□□□ -1.53
HMGB1P46-201ENST00000520062 TRBV5-3A0A0A0MS03 114 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 CCER2I3L3R5 266 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 HSPB6O14558 160 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 CTDSP2O14595 271 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 HS6ST1O60243 411 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 KLK8O60259 260 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 NKX2-2O95096 273 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 LATS1O95835 1130 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 IGLV2-14P01704 120 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 ACTN1P12814 892 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 C6P13671 934 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 ENO3P13929 434 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 SELLP14151 372 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 TBXAS1P24557 533 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 SHMT1P34896 483 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 RFC1P35251 1148 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 PIK3CAP42336 1068 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 NRIP1P48552 1158 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 PMS2P54278 862 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 MFAP4P55083 255 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms