RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 PHF19Q5T6S3 580 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 FOXR2Q6PJQ5 311 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 ENPP7Q6UWV6 458 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 PTRH1Q86Y79 214 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 PASD1Q8IV76 773 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 SLITRK4Q8IW52 837 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 TRIM59Q8IWR1 403 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 FAM26EQ8N5C1 309 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 Q8N9G6 341 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 OR6K2Q8NGY2 324 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 SPATA20Q8TB22 786 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 GPBAR1Q8TDU6 330 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 ARHGEF2Q92974 986 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 SMARCE1Q969G3 411 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 TSACCQ96A04 125 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 KLHL32Q96NJ5 620 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 CATSPER2Q96P56 530 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 RBM15Q96T37 977 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■■■■ 33.2
TRAPPC9-203ENST00000517667 SLC12A9Q9BXP2 914 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 RETREG1Q9H6L5 497 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 MBNL1Q9NR56 388 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 PPARGC1AQ9UBK2 798 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 KLQ9UEF7 1012 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 HOOK1Q9UJC3 728 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 HPCAL4Q9UM19 191 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 MAN2B2Q9Y2E5 1009 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 SNX10Q9Y5X0 201 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 SDK2Q58EX2 2172 aa11.59□□□□□ -0.55
TRAPPC9-203ENST00000517667 ANKRD36A6QL64 1941 aa11.58□□□□□ -0.55
TRAPPC9-203ENST00000517667 ZFC3H1O60293 1989 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 BICDL2A1A5D9 508 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 HGSO14964 777 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 ZW10O43264 779 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 NUDT21O43809 227 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 CD160O95971 181 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 GKP32189 559 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 KRT9P35527 623 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 SCNN1AP37088 669 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 ETV5P41161 510 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 MARSP56192 900 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 ELP6Q0PNE2 266 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 CLPPQ16740 277 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 SKIDA1Q1XH10 827 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 MYLK3Q32MK0 819 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 MAP9Q49MG5 647 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 C4orf17Q53FE4 359 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 OGFOD3Q6PK18 319 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 GDPD4Q6W3E5 623 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 RD3Q7Z3Z2 195 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 DRC7Q8IY82 874 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 WDR92Q96MX6 357 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 GDAP1L1Q96MZ0 367 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 DGKBQ9Y6T7 804 aa11.58□□□□□ -0.56
TRAPPC9-203ENST00000517667 NBASA2RRP1 2371 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 SPENQ96T58 3664 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 ZSCAN5CA6NGD5 496 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 BECN2A8MW95 431 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 CAPN5O15484 640 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 CPNE6O95741 557 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 TNFP01375 233 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 TFE3P19532 575 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 XPAP23025 273 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 MAPKAPK2P49137 400 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 RNASE9P60153 205 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 PTK2Q05397 1052 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 NCAPHQ15003 741 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 TCEA2Q15560 299 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 PTPN20Q4JDL3 420 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 C14orf28Q4W4Y0 310 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 LRRC73Q5JTD7 316 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 TTI2Q6NXR4 508 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 TRIM65Q6PJ69 517 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 PIM3Q86V86 326 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 FMR1NBQ8N0W7 255 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 IL22RA1Q8N6P7 574 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 CCDC112Q8NEF3 446 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 SHC3Q92529 594 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 PSMG3-AS1Q96PY0 264 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 TBCBQ99426 244 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 WRAP53Q9BUR4 548 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 APOOQ9BUR5 198 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 CDH19Q9H159 772 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 MAGEH1Q9H213 219 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 LRIT1Q9P2V4 623 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 DKK3Q9UBP4 350 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 APEX2Q9UBZ4 518 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 PCDHGA3Q9Y5H0 932 aa11.57□□□□□ -0.56
TRAPPC9-203ENST00000517667 AGRPO00253 132 aa11.56□□□□□ -0.56
TRAPPC9-203ENST00000517667 IGSF6O95976 241 aa11.56□□□□□ -0.56
TRAPPC9-203ENST00000517667 NOTCH2Q04721 2471 aa11.56□□□□□ -0.56
TRAPPC9-203ENST00000517667 MTM1Q13496 603 aa11.56□□□□□ -0.56
TRAPPC9-203ENST00000517667 HLTFQ14527 1009 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRAPPC9-203ENST00000517667 INPP5AQ14642 412 aa11.56□□□□□ -0.56
TRAPPC9-203ENST00000517667 C16orf72Q14CZ0 275 aa11.56□□□□□ -0.56
TRAPPC9-203ENST00000517667 AGERQ15109 404 aa11.56□□□□□ -0.56
TRAPPC9-203ENST00000517667 IGFBP7Q16270 282 aa11.56□□□□□ -0.56
TRAPPC9-203ENST00000517667 ARHGAP44Q17R89 818 aa11.56□□□□□ -0.56
TRAPPC9-203ENST00000517667 TMEM52BQ4KMG9 183 aa11.56□□□□□ -0.56
TRAPPC9-203ENST00000517667 FAM102AQ5T9C2 384 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms