RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DNTTIP2Q5QJE6 756 aaKnown RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 DAB2IPQ5VWQ8 1189 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 FAM91A1Q658Y4 838 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 TPGS2Q68CL5 300 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 RGS7BPQ6MZT1 257 aaPredicted RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 C17orf99Q6UX52 265 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 ZYG11AQ6WRX3 759 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 C15orf52Q6ZUT6 534 aaKnown RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 ARMC9Q7Z3E5 817 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 CENPVQ7Z7K6 275 aaPredicted RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 P3H2Q8IVL5 708 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 CDH26Q8IXH8 852 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 KDM8Q8N371 416 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 CPXM2Q8N436 756 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 AFAP1Q8N556 730 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 UXS1Q8NBZ7 420 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 MNS1Q8NEH6 495 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 CCDC148Q8NFR7 591 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 OR6C4Q8NGE1 309 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 NETO1Q8TDF5 533 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 LPGAT1Q92604 370 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 ANP32BQ92688 251 aaKnown RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 MRPL38Q96DV4 380 aaKnown RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 GIMAP5Q96F15 307 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 TRMT61AQ96FX7 289 aaKnown RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 C5orf30Q96GV9 206 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 LIN37Q96GY3 246 aaPredicted RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 COG3Q96JB2 828 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 MEGF10Q96KG7 1140 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 ZSWIM3Q96MP5 696 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 TMEM209Q96SK2 561 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 EGFL8Q99944 293 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 PKP2Q99959 881 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 SYT3Q9BQG1 590 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 C17orf80Q9BSJ5 609 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 DPCDQ9BVM2 203 aaPredicted RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 GCOM2Q9BZD3 368 aaPredicted RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 PUS3Q9BZE2 481 aaKnown RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 OSBPL8Q9BZF1 889 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 ZNF350Q9GZX5 532 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 NUAK2Q9H093 628 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 XYLT2Q9H1B5 865 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 EPC1Q9H2F5 836 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 RIBC2Q9H4K1 309 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 CNOT10Q9H9A5 744 aaKnown RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 TNFRSF12AQ9NP84 129 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 KCNK9Q9NPC2 374 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 SLC6A13Q9NSD5 602 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 CENPMQ9NSP4 180 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 RBM28Q9NW13 759 aaKnown RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 TMOD3Q9NYL9 352 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 KIAA1456Q9P272 454 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 HDAC6Q9UBN7 1215 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 HEY2Q9UBP5 337 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 CTNNAL1Q9UBT7 734 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 NKX1-2Q9UD57 310 aaPredicted RBP4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 STEAP1Q9UHE8 339 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 CROTQ9UKG9 612 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 ITGA11Q9UKX5 1188 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 SLC8A2Q9UPR5 921 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 ITM2BQ9Y287 266 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 CMAHPQ9Y471 501 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 SQORQ9Y6N5 450 aa4.03□□□□□ -1.76
RNU4-60P-201ENST00000517239 CYP2D7A0A087X1C5 515 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 SH3D21A4FU49 640 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 TBKBP1A7MCY6 615 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 USP17L23D6RBM5 183 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PJA2O43164 708 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PLRG1O43660 514 aaKnown RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 KIF1CO43896 1103 aaKnown RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 CYTIPO60759 359 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 NKX2-2O95096 273 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 EPN2O95208 641 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PRAMEF12O95522 483 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PDGFBP01127 241 aaPredicted RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 RLN1P04808 185 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 JUNP05412 331 aaKnown RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 ITGB1P05556 798 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 CSF1RP07333 972 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 VIMP08670 466 aaKnown RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 FAM86B2P0C5J1 330 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 TNFRSF1AP19438 455 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 MMP8P22894 467 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PRPH2P23942 346 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 SOX6P35712 828 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 SLC16A2P36021 539 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 MDH1P40925 334 aaKnown RBP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PTPN9P43378 593 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 CLCN3P51790 818 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 EFNA5P52803 228 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 BPIFB4P59827 614 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 TIAL1Q01085 375 aaKnown RBP eCLIP4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PMP22Q01453 160 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 SP2Q02086 613 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 RBPJQ06330 500 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 PIGFQ07326 219 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 IKZF1Q13422 519 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 DPYSQ14117 519 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 GAMTQ14353 236 aa4.02□□□□□ -1.77
RNU4-60P-201ENST00000517239 MXD4Q14582 209 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms