RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 LRFN5Q96NI6 719 aa-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 DPH1Q9BZG8 443 aa-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 ZNF700Q9H0M5 742 aa-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 GNB4Q9HAV0 340 aa-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 NTN4Q9HB63 628 aa-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 A1CFQ9NQ94 594 aaKnown RBP-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 CYTL1Q9NRR1 136 aa-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 PIH1D1Q9NWS0 290 aaKnown RBP-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 ARL15Q9NXU5 204 aa-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 GTSE1Q9NYZ3 720 aa-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 NUDT4Q9NZJ9 180 aa-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 MID2Q9UJV3 735 aa-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 PAM16Q9Y3D7 125 aa-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 RP1L1Q8IWN7 2480 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-557P-201ENST00000516842 IGLV5-45A0A087WSX0 123 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 LOC101059948A0A1B0GTJ6 334 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 LRCOL1A6NCL2 159 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 ACOD1A6NK06 481 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 ZIC3O60481 467 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 NDUFS7O75251 213 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 RFPL2O75678 378 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 TSHBP01222 138 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 MMP2P08253 660 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 ZSCAN5DPP0CG00 497 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 UGT1A4P22310 534 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 HNRNPA2B1P22626 353 aaKnown RBP-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 TMPOP42166 694 aaKnown RBP-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 STAT1P42224 750 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 NKX2-1P43699 371 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 AARSP49588 968 aaKnown RBP eCLIP-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 BMS1Q14692 1282 aaKnown RBP-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 ODF1Q14990 250 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 PCBP2Q15366 365 aaKnown RBP eCLIP-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 CCDC96Q2M329 555 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 AMZ1Q400G9 498 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 CCNI2Q6ZMN8 369 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 PIK3AP1Q6ZUJ8 805 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 OAFQ86UD1 273 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 SLC47A2Q86VL8 602 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 CCDC105Q8IYK2 499 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 LSMEM2Q8N112 164 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 CLASRPQ8N2M8 674 aaKnown RBP-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 SUMF1Q8NBK3 374 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 ARRDC2Q8TBH0 407 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 PMFBP1Q8TBY8 1022 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 KBTBD7Q8WVZ9 684 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 UBXN4Q92575 508 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 RND1Q92730 232 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 SEMA4DQ92854 862 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 ZNF799Q96GE5 643 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 FAXDC2Q96IV6 333 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 NEUROD6Q96NK8 337 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 ZNF577Q9BSK1 485 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 UPF3AQ9H1J1 476 aaKnown RBP-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 SFXN1Q9H9B4 322 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 ZNF71Q9NQZ8 489 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 ADPRHL2Q9NX46 363 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 KCNJ14Q9UNX9 436 aa-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 EXO1Q9UQ84 846 aaKnown RBP-0.13□□□□□ -2.43
RNU6-557P-201ENST00000516842 WI2-2373I1.2A0A1W2PRP0 233 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 ARHGAP10A1A4S6 786 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 CFAP69A5D8W1 941 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 AQP7P3A6NL99 342 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 GPRIN2O60269 458 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 IGHV4-39P01824 125 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 HMBSP08397 361 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 VDRP11473 427 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 MYOD1P15172 320 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 ATP2B1P20020 1258 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 IL4RP24394 825 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 ADKP55263 362 aaKnown RBP-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 TBL3Q12788 808 aaKnown RBP-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 FAPQ12884 760 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 C3AR1Q16581 482 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 CTU2Q2VPK5 515 aaKnown RBP-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 P3H1Q32P28 736 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 INAVAQ3KP66 663 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 KIAA1644Q3SXP7 199 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 KCNT1Q5JUK3 1230 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 FAM171A1Q5VUB5 890 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 ERAP2Q6P179 960 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 FBXO46Q6PJ61 603 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 SLC30A9Q6PML9 568 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 CCBE1Q6UXH8 406 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 PRR18Q8N4B5 295 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 MIPOL1Q8TD10 442 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 BADQ92934 168 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 SERAC1Q96JX3 654 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 MAP3K14Q99558 947 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 PSD2Q9BQI7 771 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 SLC25A32Q9H2D1 315 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 RAD21L1Q9H4I0 556 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 TMEM30AQ9NV96 361 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 STK32BQ9NY57 414 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 IL17CQ9P0M4 197 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 HDAC6Q9UBN7 1215 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 MUTYHQ9UIF7 546 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 PADI1Q9ULC6 663 aa-0.14□□□□□ -2.43
RNU6-557P-201ENST00000516842 ZMYND8Q9ULU4 1186 aaPredicted RBP-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms