RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 FKBP15Q5T1M5 1219 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 LRCH2Q5VUJ6 765 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 SDHAF4Q5VUM1 108 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 SCARA3Q6AZY7 606 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 OR6B2Q6IFH4 312 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 RPUSD3Q6P087 351 aaKnown RBP3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 ARMCX5Q6P1M9 558 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 DNAJC14Q6Y2X3 702 aaPredicted RBP3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 Q6ZPB1 254 aaPredicted RBP3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 OTUD6AQ7L8S5 288 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 USP37Q86T82 979 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 SYVN1Q86TM6 617 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 SPPL2CQ8IUH8 684 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 BBS7Q8IWZ6 715 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 C4orf19Q8IY42 314 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 RBFAQ8N0V3 343 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 SHISA5Q8N114 240 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 PIP4P2Q8N4L2 257 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 ARFGAP1Q8N6T3 406 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 C4orf32Q8N8J7 132 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 CEP120Q8N960 986 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 TMEM102Q8N9M5 508 aaPredicted RBP3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 FSIP1Q8NA03 581 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 OR6C4Q8NGE1 309 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 OR6B3Q8NGW1 331 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 OR10T2Q8NGX3 314 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 ATL2Q8NHH9 583 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 COG1Q8WTW3 980 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 PSPC1Q8WXF1 523 aaKnown RBP3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 SORCS1Q8WY21 1168 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 GOLGA1Q92805 767 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 HAS1Q92839 578 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 UBE2FQ969M7 185 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 SGSM3Q96HU1 749 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 AK8Q96MA6 479 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 CCT8L2Q96SF2 557 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 HSD17B14Q9BPX1 270 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 VKORC1Q9BQB6 163 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 JPH2Q9BR39 696 aaPredicted RBP3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 BBS2Q9BXC9 721 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 ULBP3Q9BZM4 244 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 OCEL1Q9H607 264 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 ZSWIM4Q9H7M6 989 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 FBRSQ9HAH7 460 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 PRSS16Q9NQE7 514 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 TMEM51Q9NW97 253 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 ELOVL2Q9NXB9 296 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 FAM53CQ9NYF3 392 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 SPASTQ9UBP0 616 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 GLS2Q9UI32 602 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 KCNG1Q9UIX4 513 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 FBXO10Q9UK96 956 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 TRHDEQ9UKU6 1024 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 FZD4Q9ULV1 537 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 PYCARDQ9ULZ3 195 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 SCML1Q9UN30 329 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 ATP6V1DQ9Y5K8 247 aa3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 HUWE1Q7Z6Z7 4374 aaKnown RBP3.23□□□□□ -1.89
SCARNA13-201ENST00000516672 SCN2AQ99250 2005 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 MYCBP2O75592 4640 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 A0A0A6YYJ9 748 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 SMIM28A0A1B0GU29 152 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 C21orf140B9A014 251 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 SLCO1B7G3V0H7 640 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 ACOT7O00154 380 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 MID1O15344 667 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 ASAP2O43150 1006 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 LIASO43766 372 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 SLC37A4O43826 429 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 KIAA0513O60268 411 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 RNGTTO60942 597 aaKnown RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 AP1G2O75843 785 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 WISP2O76076 250 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 LETM1O95202 739 aaPredicted RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 TDP2O95551 362 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 OLFM2O95897 454 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 PIGRP01833 764 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 OR52Z1P0C646 297 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 LYL1P12980 280 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 ZNF16P17020 682 aaPredicted RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 RPA1P27694 616 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 PTPN4P29074 926 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 LONP1P36776 959 aaKnown RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 RFC5P40937 340 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 NAMPTP43490 491 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 ARCN1P48444 511 aaKnown RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 TAF6P49848 677 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 TOB1P50616 345 aaPredicted RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 RRADP55042 308 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 MFAP3P55082 362 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 POU5F1BQ06416 359 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 SLC39A14Q15043 492 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 E2F5Q15329 346 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 SETMARQ53H47 684 aaPredicted RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 PRRT3Q5FWE3 981 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 EARS2Q5JPH6 523 aaKnown RBP3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 TTC38Q5R3I4 469 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 HAUS3Q68CZ6 603 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 OVOS1Q6IE37 1185 aa3.22□□□□□ -1.89
SCARNA13-201ENST00000516672 DTHD1Q6ZMT9 781 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms