RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 TIGD7Q6NT04 549 aaPredicted RBP11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 ERAP2Q6P179 960 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 Q6ZSR6 202 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 ABI3BPQ7Z7G0 1075 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 SPATS2Q86XZ4 545 aaKnown RBP11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 CPNE8Q86YQ8 564 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 RHOT1Q8IXI2 618 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 DENND6BQ8NEG7 585 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 CXorf40AQ8TE69 158 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 RAPGEF5Q92565 580 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 FATE1Q969F0 183 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 ECHDC3Q96DC8 303 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 IFT43Q96FT9 208 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 CALR3Q96L12 384 aaKnown RBP11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 BMFQ96LC9 184 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 TSGA13Q96PP4 275 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 RNF157Q96PX1 679 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 MAK16Q9BXY0 300 aaKnown RBP11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 KLHL11Q9NVR0 708 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 DDX56Q9NY93 547 aaKnown RBP11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 ANGPTL2Q9UKU9 493 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 CA5BQ9Y2D0 317 aa11.31□□□□□ -0.6
SCARNA16.1-201ENST00000516133 PLXNA2O75051 1894 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 A0A0A6YYK5 440 aaPredicted RBP11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 LRRD1A4D1F6 860 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 CFAP69A5D8W1 941 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 TOR1BO14657 336 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 MUSKO15146 869 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 SPINT1O43278 529 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 MMP20O60882 483 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 SOCS5O75159 536 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 CR2P20023 1033 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 FECHP22830 423 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 CES1P23141 567 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 CCNCP24863 283 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 NFKBIAP25963 317 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 MMP13P45452 471 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 RABIFP47224 123 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 CLDN2P57739 230 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 FGL2Q14314 439 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 IFI16Q16666 785 aaKnown RBP11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 NCBP2-AS2Q69YL0 99 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 TEX26Q8N6G2 289 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 PQLC3Q8N755 202 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 OR13H1Q8NG92 308 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 SAP25Q8TEE9 199 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 CENPTQ96BT3 561 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 ZNF830Q96NB3 372 aaPredicted RBP11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 NUDCD1Q96RS6 583 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 KLF6Q99612 283 aaPredicted RBP11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 MYOCQ99972 504 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 FZD3Q9NPG1 666 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 PCDH12Q9NPG4 1184 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 SCUBE2Q9NQ36 999 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 AMACRQ9UHK6 382 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 GGT7Q9UJ14 662 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 APOBEC2Q9Y235 224 aaKnown RBP11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 ITM2BQ9Y287 266 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 ATP8A1Q9Y2Q0 1164 aa11.3□□□□□ -0.6
SCARNA16.1-201ENST00000516133 POM121BA6NF01 834 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 TRAFD1O14545 582 aaPredicted RBP11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 MATN3O15232 486 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 RAD51BO15315 384 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 TNFSF14O43557 240 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 SPOPO43791 374 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 MFSD11O43934 449 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 NDUFA10O95299 355 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 ZFXP17010 805 aaPredicted RBP11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 ITIH2P19823 946 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 COMTP21964 271 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 EPHA8P29322 1005 aaPredicted RBP11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 YPEL5P62699 121 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 FAM193AP78312 1265 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 IL9RQ01113 521 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 SHBQ15464 509 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 LRRC73Q5JTD7 316 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 KYAT3Q6YP21 454 aaKnown RBP11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 GCNT7Q6ZNI0 430 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 BAHD1Q8TBE0 780 aaPredicted RBP11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 MAML1Q92585 1016 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 MGME1Q9BQP7 344 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 WRAP53Q9BUR4 548 aaKnown RBP11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 NOD2Q9HC29 1040 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 IMPACTQ9P2X3 320 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 ALG6Q9Y672 507 aa11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 GOLGA4Q13439 2230 aaKnown RBP11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 ARID1BQ8NFD5 2236 aaPredicted RBP11.29□□□□□ -0.6
SCARNA16.1-201ENST00000516133 SPTY2D1-AS1A0A0U1RR47 76 aa11.28□□□□□ -0.6
SCARNA16.1-201ENST00000516133 C3orf70A6NLC5 250 aaPredicted RBP11.28□□□□□ -0.6
SCARNA16.1-201ENST00000516133 HTRA2O43464 458 aaPredicted RBP11.28□□□□□ -0.6
SCARNA16.1-201ENST00000516133 PSTPIP1O43586 416 aa11.28□□□□□ -0.6
SCARNA16.1-201ENST00000516133 LZTS3O60299 673 aaPredicted RBP11.28□□□□□ -0.6
SCARNA16.1-201ENST00000516133 NEBLO76041 1014 aa11.28□□□□□ -0.6
SCARNA16.1-201ENST00000516133 CCNB1P14635 433 aa11.28□□□□□ -0.6
SCARNA16.1-201ENST00000516133 MMP12P39900 470 aa11.28□□□□□ -0.6
SCARNA16.1-201ENST00000516133 LIG3P49916 1009 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms