RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 IL22Q9GZX6 179 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 CMTM6Q9NX76 183 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 PTGFRNQ9P2B2 879 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 GIT1Q9Y2X7 761 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 CPS1P31327 1500 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 RIC1Q4ADV7 1423 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 NQO1P15559 274 aaKnown RBP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 GRSF1Q12849 480 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 CPSF6Q16630 551 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 PIGZQ86VD9 579 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 KLK6Q92876 244 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 ERVK-11Q9UQG0 969 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 POLR1AO95602 1720 aaPredicted RBP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 SSR2P43308 183 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 OMPP47874 163 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 DLG4P78352 724 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 SULT2A1Q06520 285 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 DPYSL3Q14195 570 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 SNX32Q86XE0 403 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 C12orf29Q8N999 325 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 ZNF483Q8TF39 744 aaPredicted RBP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 RORBQ92753 470 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 SLC38A2Q96QD8 506 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 AARSD1Q9BTE6 412 aaKnown RBP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 TMEM138Q9NPI0 162 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 OGDHLQ9ULD0 1010 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 TNS2Q63HR2 1409 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 MAGEA13PA6NCF6 341 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 QSOX1O00391 747 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 PDE5AO76074 875 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 PIGNO95427 931 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 ZSCAN5DPP0CG00 497 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 GNSP15586 552 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 MANFP55145 182 aaKnown RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 GAL3ST4Q96RP7 486 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 KBTBD4Q9NVX7 518 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 PSMD13Q9UNM6 376 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 SLC31A1O15431 190 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 DCXO43602 365 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 ZNF155Q12901 538 aaPredicted RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 NDUFA9Q16795 377 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 RASSF6Q6ZTQ3 369 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 ZDHHC13Q8IUH4 622 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 TPRKBQ9Y3C4 175 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 RIMS1Q86UR5 1692 aaKnown RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 FAM25EA8MYX2 175 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 KDELR1P24390 212 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 SPIBQ01892 262 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 NEK5Q6P3R8 708 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 ISLR2Q6UXK2 745 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 GALNT13Q8IUC8 556 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 OFCC1Q8IZS5 231 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 NMD3Q96D46 503 aaKnown RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 MYO19Q96H55 970 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 ATXN2Q99700 1313 aaKnown RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 PECAM1P16284 738 aaPredicted RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 SLC12A3P55017 1021 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 PKNOX1P55347 436 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 KRT74Q7RTS7 529 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 ANKS1BQ7Z6G8 1248 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 METTL3Q86U44 580 aaKnown RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 PCDH20Q8N6Y1 951 aaKnown RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 CDYL2Q8N8U2 506 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 ACTRT1Q8TDG2 376 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 LINGO1Q96FE5 620 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 BHLHE41Q9C0J9 482 aaPredicted RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 TMEM134Q9H6X4 195 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 DNAJC11Q9NVH1 559 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 THAP1Q9NVV9 213 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 PER2O15055 1255 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 MDM4O15151 490 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 OR10H3O60404 316 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 LYNP07948 512 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 LPOP22079 712 aaPredicted RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 PRKAA2P54646 552 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 ITGA1P56199 1179 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 DGCR6Q14129 220 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 FRG1Q14331 258 aaKnown RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 C9orf64Q5T6V5 341 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 IZUMO2Q6UXV1 221 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 TMPRSS11BQ86T26 416 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 KIAA0895Q8NCT3 520 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 SETD9Q8NE22 299 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 ASB2Q96Q27 587 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 DGCR6LQ9BY27 220 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 CLDND1Q9NY35 253 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 MARK1Q9P0L2 795 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 H3BM21 787 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 HMGB3O15347 200 aaKnown RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 CLOCKO15516 846 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 MSI1O43347 362 aaKnown RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 CORO1AP31146 461 aaKnown RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 UBE2R2Q712K3 238 aaPredicted RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 UNC93AQ86WB7 457 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 APOPT1Q96IL0 206 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 NXF3Q9H4D5 531 aaKnown RBP11.07□□□□□ -0.64
TRIM41-209ENST00000515834 CAB39LQ9H9S4 337 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 GSTK1Q9Y2Q3 226 aa11.07□□□□□ -0.64
TRIM41-209ENST00000515834 COLEC10Q9Y6Z7 277 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms