RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 TRIM58Q8NG06 486 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 PDCD6IPQ8WUM4 868 aaKnown RBP26.21■■□□□ 1.79
DDR1-279ENST00000515529 SERAC1Q96JX3 654 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 AASDHPPTQ9NRN7 309 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 A0A1W2PQ67 120 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 TSPAN11A1L157 253 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 MTSS1O43312 755 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 LATO43561 262 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 SOCS5O75159 536 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 SYPP08247 313 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 TIMP2P16035 220 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 NFKBIAP25963 317 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 AFF3P51826 1226 aaKnown RBP26.2■■□□□ 1.78
DDR1-279ENST00000515529 ATXN3P54252 364 aaPredicted RBP26.2■■□□□ 1.78
DDR1-279ENST00000515529 IRX4P78413 519 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 RPS6KA1Q15418 735 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 UGP2Q16851 508 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 SLC45A4Q5BKX6 768 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 SEL1L2Q5TEA6 688 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 VOPP1Q96AW1 172 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 SKA1Q96BD8 255 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 FERMT1Q9BQL6 677 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 TM9SF3Q9HD45 589 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 DMTF1Q9Y222 760 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 PCDHGC4Q9Y5F7 938 aa26.2■■□□□ 1.78
DDR1-279ENST00000515529 HACD1B0YJ81 288 aa26.19■■□□□ 1.78
DDR1-279ENST00000515529 H7C0C1 242 aa26.19■■□□□ 1.78
DDR1-279ENST00000515529 HLA-DQB2P05538 268 aa26.19■■□□□ 1.78
DDR1-279ENST00000515529 CA4P22748 312 aa26.19■■□□□ 1.78
DDR1-279ENST00000515529 ATP5OP48047 213 aa26.19■■□□□ 1.78
DDR1-279ENST00000515529 RACK1P63244 317 aaKnown RBP26.19■■□□□ 1.78
DDR1-279ENST00000515529 ARHGAP8P85298 464 aa26.19■■□□□ 1.78
DDR1-279ENST00000515529 AADACL2Q6P093 401 aa26.19■■□□□ 1.78
DDR1-279ENST00000515529 CXorf40AQ8TE69 158 aa26.19■■□□□ 1.78
DDR1-279ENST00000515529 IL12RB2Q99665 862 aa26.19■■□□□ 1.78
DDR1-279ENST00000515529 EDEM2Q9BV94 578 aa26.19■■□□□ 1.78
DDR1-279ENST00000515529 KCNF1Q9H3M0 494 aa26.19■■□□□ 1.78
DDR1-279ENST00000515529 ITM2BQ9Y287 266 aa26.19■■□□□ 1.78
DDR1-279ENST00000515529 SLC31A1O15431 190 aa26.18■■□□□ 1.78
DDR1-279ENST00000515529 DSC2Q02487 901 aa26.18■■□□□ 1.78
DDR1-279ENST00000515529 ZBTB17Q13105 803 aa26.18■■□□□ 1.78
DDR1-279ENST00000515529 SGCGQ13326 291 aa26.18■■□□□ 1.78
DDR1-279ENST00000515529 PRKD1Q15139 912 aaPredicted RBP26.18■■□□□ 1.78
DDR1-279ENST00000515529 SEL1L3Q68CR1 1132 aa26.18■■□□□ 1.78
DDR1-279ENST00000515529 NAPEPLDQ6IQ20 393 aa26.18■■□□□ 1.78
DDR1-279ENST00000515529 B4GALNT4Q76KP1 1039 aa26.18■■□□□ 1.78
DDR1-279ENST00000515529 KLK6Q92876 244 aa26.18■■□□□ 1.78
DDR1-279ENST00000515529 CAPN10Q9HC96 672 aa26.18■■□□□ 1.78
DDR1-279ENST00000515529 PCDH12Q9NPG4 1184 aa26.18■■□□□ 1.78
DDR1-279ENST00000515529 ATP8A1Q9Y2Q0 1164 aa26.18■■□□□ 1.78
DDR1-279ENST00000515529 GVINP1Q7Z2Y8 2422 aa26.18■■□□□ 1.78
DDR1-279ENST00000515529 LNP1A1A4G5 178 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 AREL1O15033 823 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 CPP00450 1065 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 CSNK1EP49674 416 aaKnown RBP26.17■■□□□ 1.78
DDR1-279ENST00000515529 OTUD4Q01804 1114 aaKnown RBP26.17■■□□□ 1.78
DDR1-279ENST00000515529 CCDC173Q0VFZ6 552 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 XRCC4Q13426 336 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 ZNF284Q2VY69 593 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 ARMC12Q5T9G4 340 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 MEI1Q5TIA1 1274 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 ALG1LQ6GMV1 187 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 C1orf216Q8TAB5 229 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 ACTL9Q8TC94 416 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 ECHDC3Q96DC8 303 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 SLC6A18Q96N87 628 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 AGAP3Q96P47 875 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 QKIQ96PU8 341 aaKnown RBP eCLIP26.17■■□□□ 1.78
DDR1-279ENST00000515529 GTPBP2Q9BX10 602 aaKnown RBP26.17■■□□□ 1.78
DDR1-279ENST00000515529 CEP41Q9BYV8 373 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 EBF2Q9HAK2 575 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 GGT7Q9UJ14 662 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 ZFR2Q9UPR6 939 aaKnown RBP26.17■■□□□ 1.78
DDR1-279ENST00000515529 PCDHB9Q9Y5E1 797 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 RAI2Q9Y5P3 530 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 USP34Q70CQ2 3546 aa26.17■■□□□ 1.78
DDR1-279ENST00000515529 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.16■■□□□ 1.78
DDR1-279ENST00000515529 PRAMEF26H0Y7S4 382 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 TRAFD1O14545 582 aaPredicted RBP26.16■■□□□ 1.78
DDR1-279ENST00000515529 PRLRP16471 622 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 ENGP17813 658 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 AKT2P31751 481 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 GRIA4P48058 902 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 C21orf59P57076 290 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 FAM193AP78312 1265 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 STAT4Q14765 748 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 NOMO1Q15155 1222 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 CDKL3Q8IVW4 592 aaPredicted RBP26.16■■□□□ 1.78
DDR1-279ENST00000515529 NDUFAF2Q8N183 169 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 TTC13Q8NBP0 860 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 ORAI3Q9BRQ5 295 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 HERPUD2Q9BSE4 406 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 SLC17A9Q9BYT1 436 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 ZDHHC5Q9C0B5 715 aa26.16■■□□□ 1.78
DDR1-279ENST00000515529 C10orf142B7Z368 130 aa26.15■■□□□ 1.78
DDR1-279ENST00000515529 ARHGAP33O14559 1287 aa26.15■■□□□ 1.78
DDR1-279ENST00000515529 HTRA2O43464 458 aaPredicted RBP26.15■■□□□ 1.78
DDR1-279ENST00000515529 CD38P28907 300 aa26.15■■□□□ 1.78
DDR1-279ENST00000515529 EIF3EP60228 445 aaKnown RBP26.15■■□□□ 1.78
DDR1-279ENST00000515529 TRAF2Q12933 501 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms