RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 FUT11Q495W5 492 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 DGKKQ5KSL6 1271 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 GRTP1Q5TC63 336 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 TRIM68Q6AZZ1 485 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 VITQ6UXI7 678 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 Q7L0L9 218 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 LMNTD2Q8IXW0 634 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 KDM1BQ8NB78 822 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 CALML6Q8TD86 181 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 UCMAQ8WVF2 138 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 ZNF641Q96N77 438 aaPredicted RBP16.13■□□□□ 0.17
NUP54-214ENST00000514307 FCRL3Q96P31 734 aaPredicted RBP16.13■□□□□ 0.17
NUP54-214ENST00000514307 TRIB3Q96RU7 358 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 TDRD1Q9BXT4 1180 aaKnown RBP16.13■□□□□ 0.17
NUP54-214ENST00000514307 TTYH1Q9H313 450 aaPredicted RBP16.13■□□□□ 0.17
NUP54-214ENST00000514307 TRABDQ9H4I3 376 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 ELOVL2Q9NXB9 296 aa16.13■□□□□ 0.17
NUP54-214ENST00000514307 HECAQ9UBI9 543 aaPredicted RBP16.13■□□□□ 0.17
NUP54-214ENST00000514307 ZCWPW2A0A1B0GU75 182 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 SOCS5O75159 536 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 TBX10O75333 385 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 ATXN1LP0C7T5 689 aaKnown RBP16.12■□□□□ 0.17
NUP54-214ENST00000514307 NFKBIAP25963 317 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 LTBRP36941 435 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 CHRNA4P43681 627 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 POLR2LP62875 67 aaKnown RBP16.12■□□□□ 0.17
NUP54-214ENST00000514307 PPP2R2AP63151 447 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 DLX2Q07687 328 aaPredicted RBP16.12■□□□□ 0.17
NUP54-214ENST00000514307 EIF4HQ15056 248 aaKnown RBP16.12■□□□□ 0.17
NUP54-214ENST00000514307 TMED2Q15363 201 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 UGP2Q16851 508 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 ITPRIPL2Q3MIP1 535 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 TSTD2Q5T7W7 516 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 KDM7AQ6ZMT4 941 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 MARK2Q7KZI7 788 aaKnown RBP16.12■□□□□ 0.17
NUP54-214ENST00000514307 MICALL1Q8N3F8 863 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 DCAKDQ8WVC6 231 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 ALKBH8Q96BT7 664 aaKnown RBP16.12■□□□□ 0.17
NUP54-214ENST00000514307 EXOC2Q96KP1 924 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 RPL10LQ96L21 214 aaKnown RBP16.12■□□□□ 0.17
NUP54-214ENST00000514307 CPNE1Q99829 537 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 CIPCQ9C0C6 399 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 PLAC1Q9HBJ0 212 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 EPS15L1Q9UBC2 864 aa16.12■□□□□ 0.17
NUP54-214ENST00000514307 EVLQ9UI08 416 aaPredicted RBP16.12■□□□□ 0.17
NUP54-214ENST00000514307 DOCK4Q8N1I0 1966 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 MROH6A6NGR9 719 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 NMBRP28336 390 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 GCAP28676 217 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 GDI1P31150 447 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 SPRP35270 261 aaPredicted RBP16.11■□□□□ 0.17
NUP54-214ENST00000514307 HADHAP40939 763 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 EIF2DP41214 584 aaKnown RBP16.11■□□□□ 0.17
NUP54-214ENST00000514307 CTSOP43234 321 aaPredicted RBP16.11■□□□□ 0.17
NUP54-214ENST00000514307 ADGRE1Q14246 886 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 IHHQ14623 411 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 TAF1AQ15573 450 aaPredicted RBP16.11■□□□□ 0.17
NUP54-214ENST00000514307 ATXN7L2Q5T6C5 722 aaPredicted RBP16.11■□□□□ 0.17
NUP54-214ENST00000514307 TRMT10BQ6PF06 316 aaKnown RBP16.11■□□□□ 0.17
NUP54-214ENST00000514307 CES3Q6UWW8 571 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 EXOC3L1Q86VI1 746 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 KCNMB4Q86W47 210 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 RASSF3Q86WH2 238 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 RNF135Q8IUD6 432 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 ETFBKMTQ8IXQ9 262 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 STYXQ8WUJ0 223 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 PDCD6IPQ8WUM4 868 aaKnown RBP16.11■□□□□ 0.17
NUP54-214ENST00000514307 SPOCK2Q92563 424 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 MFSD3Q96ES6 412 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 LRIG1Q96JA1 1093 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 SMC6Q96SB8 1091 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 TM6SF2Q9BZW4 377 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 MAGEE1Q9HCI5 957 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 EURLQ9NYK6 297 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.11■□□□□ 0.17
NUP54-214ENST00000514307 SLCO3A1Q9UIG8 710 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 ADAM21Q9UKJ8 722 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 PCDHB9Q9Y5E1 797 aa16.11■□□□□ 0.17
NUP54-214ENST00000514307 SLC7A4O43246 635 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 VAPBO95292 243 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 PGLSO95336 258 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 ERVK-10P10266 1014 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 HPDP32754 393 aaPredicted RBP16.1■□□□□ 0.17
NUP54-214ENST00000514307 GP5P40197 560 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 GRIA4P48058 902 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 POLD2P49005 469 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 MSLNQ13421 630 aaPredicted RBP16.1■□□□□ 0.17
NUP54-214ENST00000514307 CNGA3Q16281 694 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 GEN1Q17RS7 908 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 HSP90AA5PQ58FG0 334 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 TEDDM1Q5T9Z0 273 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 KIAA0930Q6ICG6 404 aaPredicted RBP16.1■□□□□ 0.17
NUP54-214ENST00000514307 ESRP1Q6NXG1 681 aaKnown RBP16.1■□□□□ 0.17
NUP54-214ENST00000514307 C22orf39Q6P5X5 142 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 PARM1Q6UWI2 310 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 SDCCAG8Q86SQ7 713 aaPredicted RBP16.1■□□□□ 0.17
NUP54-214ENST00000514307 CYP4X1Q8N118 509 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 SMRP1Q8NCR6 262 aa16.1■□□□□ 0.17
NUP54-214ENST00000514307 LPCAT1Q8NF37 534 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms