RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 STAG1Q8WVM7 1258 aa3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 FAM151AQ8WW52 585 aa3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 ZNF419Q96HQ0 510 aaPredicted RBP3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 RHOBTB2Q9BYZ6 727 aa3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 TMEM39BQ9GZU3 492 aa3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 DNAJC18Q9H819 358 aa3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 FAM204AQ9H8W3 233 aa3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 ZBTB26Q9HCK0 441 aa3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 CTNNA3Q9UI47 895 aa3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 MYH7BA7E2Y1 1941 aa3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 MGAMO43451 1857 aa3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 PLXNA1Q9UIW2 1896 aa3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 THSD7BQ9C0I4 1608 aa3.81□□□□□ -1.8
ATP2C1-220ENST00000513636 LCTP09848 1927 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 WDR81Q562E7 1941 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 KIAA1217Q5T5P2 1943 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 PLXNB2O15031 1838 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 DDTLA6NHG4 134 aaPredicted RBP3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 E7EWF7 191 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 MGEA5O60502 916 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 MT-ND5P03915 603 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 UMODP07911 640 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 PCP11498 1178 aaKnown RBP3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 VEGFAP15692 232 aaPredicted RBP3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 CASTP20810 708 aaKnown RBP3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 PDLIM4P50479 330 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 GABPAQ06546 454 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 PIN1Q13526 163 aaPredicted RBP3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 KRT32Q14532 448 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 PLCB4Q15147 1175 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 NECTIN1Q15223 517 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 KIF19Q2TAC6 998 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 C12orf60Q5U649 245 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 DCAF12L2Q5VW00 463 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 WBP2NLQ6ICG8 309 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 CTR9Q6PD62 1173 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 ARMC9Q7Z3E5 817 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 GPSM1Q86YR5 675 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 MB21D2Q8IYB1 491 aaPredicted RBP3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 KIAA0319LQ8IZA0 1049 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 GLMPQ8WWB7 406 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 DYNLL2Q96FJ2 89 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 SNX22Q96L94 193 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 JAKMIP1Q96N16 626 aaKnown RBP3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 RNF41Q9H4P4 317 aaPredicted RBP3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 SPAG4Q9NPE6 437 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 SWAP70Q9UH65 585 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 HERC5Q9UII4 1024 aaKnown RBP3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 L1RE1Q9UN81 338 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 TNFSF13BQ9Y275 285 aa3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.8□□□□□ -1.8
ATP2C1-220ENST00000513636 WDR19Q8NEZ3 1342 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 BUB3O43684 328 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 PRDM1O75626 825 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 IGLV2-11P01706 119 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 RFPL3SP0C7P2 107 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 ALADP13716 330 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 TGM2P21980 687 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 PSMA5P28066 241 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 SHMT1P34896 483 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 NF2P35240 595 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 NT5C2P49902 561 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 ABATP80404 500 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 KIF5AQ12840 1032 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 TRDNQ13061 729 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 GALNT3Q14435 633 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 ADCK5Q3MIX3 580 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 RNF220Q5VTB9 566 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 FAM90A2PQ658T7 463 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 CCDC144NLQ6NUI1 221 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 BLOC1S2Q6QNY1 142 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 MFSD6Q6ZSS7 791 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 FJX1Q86VR8 437 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 NCOA7Q8NI08 942 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 LRTOMTQ8WZ04 291 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 ESR2Q92731 530 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 DCPSQ96C86 337 aaKnown RBP3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 CDCA5Q96FF9 252 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 IGSF21Q96ID5 467 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 NEK1Q96PY6 1258 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 GLIS2Q9BZE0 524 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 UPF3BQ9BZI7 483 aaKnown RBP3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 KRT23Q9C075 422 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 DEFB129Q9H1M3 183 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 RXFP3Q9NSD7 469 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 TYW1Q9NV66 732 aaKnown RBP3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 PLEKHB1Q9UF11 243 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 PGAP2Q9UHJ9 254 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 MAGED2Q9UNF1 606 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 B3GNT3Q9Y2A9 372 aa3.79□□□□□ -1.8
ATP2C1-220ENST00000513636 NID2Q14112 1375 aa3.78□□□□□ -1.8
ATP2C1-220ENST00000513636 CASP8AP2Q9UKL3 1982 aa3.78□□□□□ -1.8
ATP2C1-220ENST00000513636 TSPY2A6NKD2 308 aa3.78□□□□□ -1.8
ATP2C1-220ENST00000513636 VWA5AO00534 786 aa3.78□□□□□ -1.8
ATP2C1-220ENST00000513636 MPHOSPH10O00566 681 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-220ENST00000513636 SH2B2O14492 632 aaPredicted RBP3.78□□□□□ -1.8
ATP2C1-220ENST00000513636 PRC1O43663 620 aa3.78□□□□□ -1.8
ATP2C1-220ENST00000513636 LIASO43766 372 aa3.78□□□□□ -1.8
ATP2C1-220ENST00000513636 RANBP6O60518 1105 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-220ENST00000513636 IL18RAPO95256 599 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms