RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 KIF26AQ9ULI4 1882 aaPredicted RBP8.43□□□□□ -1.06
RNF4-220ENST00000513578 MYOFQ9NZM1 2061 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 A0A1W2PRU2 124 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CCT8L1PA6NM43 557 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CBX4O00257 560 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 ZNF197O14709 1029 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 FZD6O60353 706 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 PLIN3O60664 434 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 XYLBO75191 536 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 VAPBO95292 243 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CRTAMO95727 393 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 GSRP00390 522 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 PRLP01236 227 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 AHSGP02765 367 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 PROCP04070 461 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CYBBP04839 570 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 PRKCGP05129 697 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 APOA4P06727 396 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 GABRB3P28472 473 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 MZF1P28698 734 aaPredicted RBP8.43□□□□□ -1.06
RNF4-220ENST00000513578 CRABP2P29373 138 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CA8P35219 290 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CSKP41240 450 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CCR2P41597 374 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 MAPK8P45983 427 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CD151P48509 253 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CLCN5P51795 746 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 PRKAA2P54646 552 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 RPL26P61254 145 aaKnown RBP8.43□□□□□ -1.06
RNF4-220ENST00000513578 AP1S1P61966 158 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CDH18Q13634 790 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 ZKSCAN8Q15776 578 aaPredicted RBP8.43□□□□□ -1.06
RNF4-220ENST00000513578 FSCBQ5H9T9 825 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 PLPP4Q5VZY2 271 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 OTOAQ7RTW8 1153 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 SRLQ86TD4 932 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 BBS7Q8IWZ6 715 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CMTM8Q8IZV2 173 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CARNMT1Q8N4J0 409 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 SLC25A41Q8N5S1 370 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 GBP7Q8N8V2 638 aaPredicted RBP8.43□□□□□ -1.06
RNF4-220ENST00000513578 OR13J1Q8NGT2 312 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 OR6Y1Q8NGX8 325 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 RDH11Q8TC12 318 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 CCT6BQ92526 530 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 PTPRN2Q92932 1015 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 E2F7Q96AV8 911 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 OTUB2Q96DC9 234 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 LBHD1Q9BQE6 289 aaPredicted RBP8.43□□□□□ -1.06
RNF4-220ENST00000513578 C17orf80Q9BSJ5 609 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 C2orf49Q9BVC5 232 aaPredicted RBP8.43□□□□□ -1.06
RNF4-220ENST00000513578 SLC13A1Q9BZW2 595 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 LMAN2LQ9H0V9 348 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 NOD2Q9HC29 1040 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 SCUBE2Q9NQ36 999 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 MAN1C1Q9NR34 630 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 ABCB8Q9NUT2 735 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 HACD3Q9P035 362 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 TBC1D14Q9P2M4 693 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 SLC2A6Q9UGQ3 507 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 VPS51Q9UID3 782 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 FBXO5Q9UKT4 447 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 RPL26L1Q9UNX3 145 aaKnown RBP8.43□□□□□ -1.06
RNF4-220ENST00000513578 USH1CQ9Y6N9 552 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 BRCA2P51587 3418 aa8.43□□□□□ -1.06
RNF4-220ENST00000513578 A0A096LPK6 155 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 GRM6O15303 877 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 CCL16O15467 120 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 SNNO75324 88 aaPredicted RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 RPP40O75818 363 aaKnown RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 KIAA0754O94854 1291 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 TMCC1O94876 653 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 PENKP01210 267 aaPredicted RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 ATP5BP06576 529 aaKnown RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 C2P06681 752 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 RHOP08100 348 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 TROVE2P10155 538 aaKnown RBP eCLIP8.42□□□□□ -1.06
RNF4-220ENST00000513578 OGNP20774 298 aaKnown RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 GLDCP23378 1020 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 GRK2P25098 689 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 SLC26A3P40879 764 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 SLC1A2P43004 574 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 RGRP47804 291 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 CORO7P57737 925 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 POU4F1Q01851 419 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 IFT88Q13099 833 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 USP4Q13107 963 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 DMC1Q14565 340 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 GRM3Q14832 879 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 TAF1AQ15573 450 aaPredicted RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 GPR158Q5T848 1215 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 N4BP2L1Q5TBK1 243 aaPredicted RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 CCDC121Q6ZUS5 278 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 TRPM8Q7Z2W7 1104 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 KIAA0907Q7Z7F0 614 aaPredicted RBP8.42□□□□□ -1.06
RNF4-220ENST00000513578 NUDCD3Q8IVD9 361 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 MFN1Q8IWA4 741 aa8.42□□□□□ -1.06
RNF4-220ENST00000513578 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.42□□□□□ -1.06
RNF4-220ENST00000513578 ARMC2Q8NEN0 867 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms